Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.96□□□□□ -2.1
APOEP02649 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.96□□□□□ -2.1
APOEP02649 AC090897.2-201ENST00000581715 130 ntBASIC1.96□□□□□ -2.1
APOEP02649 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.96□□□□□ -2.1
APOEP02649 AC091946.2-201ENST00000606105 291 ntBASIC1.96□□□□□ -2.1
APOEP02649 AL590099.1-201ENST00000615276 138 ntBASIC1.96□□□□□ -2.1
APOEP02649 AL449363.1-201ENST00000617815 186 ntBASIC1.96□□□□□ -2.1
APOEP02649 AC008443.7-201ENST00000622195 246 ntBASIC1.96□□□□□ -2.1
APOEP02649 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.96□□□□□ -2.1
APOEP02649 AC005832.2-201ENST00000538921 1430 ntBASIC1.96□□□□□ -2.1
APOEP02649 AC002543.1-201ENST00000299783 1954 ntBASIC1.96□□□□□ -2.1
APOEP02649 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
APOEP02649 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.95□□□□□ -2.1
APOEP02649 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOEP02649 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
APOEP02649 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
APOEP02649 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
APOEP02649 TAF13P2-201ENST00000416876 286 ntBASIC1.95□□□□□ -2.1
APOEP02649 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.95□□□□□ -2.1
APOEP02649 AL121882.1-201ENST00000422893 417 ntBASIC1.95□□□□□ -2.1
APOEP02649 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.95□□□□□ -2.1
APOEP02649 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.95□□□□□ -2.1
APOEP02649 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.95□□□□□ -2.1
APOEP02649 RPL35AP22-201ENST00000436855 335 ntBASIC1.95□□□□□ -2.1
APOEP02649 AL451074.3-201ENST00000437709 472 ntBASIC1.95□□□□□ -2.1
APOEP02649 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.95□□□□□ -2.1
APOEP02649 Z82210.1-201ENST00000440037 231 ntBASIC1.95□□□□□ -2.1
APOEP02649 OR10R1P-201ENST00000441524 1141 ntBASIC1.95□□□□□ -2.1
APOEP02649 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.95□□□□□ -2.1
APOEP02649 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.95□□□□□ -2.1
APOEP02649 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.95□□□□□ -2.1
APOEP02649 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.95□□□□□ -2.1
APOEP02649 RPL21P99-201ENST00000480369 423 ntBASIC1.95□□□□□ -2.1
APOEP02649 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.95□□□□□ -2.1
APOEP02649 AC091860.1-201ENST00000505723 432 ntBASIC1.95□□□□□ -2.1
APOEP02649 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
APOEP02649 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.95□□□□□ -2.1
APOEP02649 MIR3199-1-201ENST00000582434 88 ntBASIC1.95□□□□□ -2.1
APOEP02649 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.95□□□□□ -2.1
APOEP02649 AC093673.2-201ENST00000609674 331 ntBASIC1.95□□□□□ -2.1
APOEP02649 AC004009.2-201ENST00000623016 728 ntBASIC1.95□□□□□ -2.1
APOEP02649 PISRT1-201ENST00000626175 531 ntBASIC1.95□□□□□ -2.1
APOEP02649 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
APOEP02649 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC004520.1-201ENST00000608362 1413 ntBASIC1.94□□□□□ -2.1
APOEP02649 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
APOEP02649 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
APOEP02649 AL158050.1-201ENST00000416077 457 ntBASIC1.94□□□□□ -2.1
APOEP02649 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.94□□□□□ -2.1
APOEP02649 AL590233.1-201ENST00000430017 456 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.94□□□□□ -2.1
APOEP02649 GXYLT1P1-201ENST00000446657 490 ntBASIC1.94□□□□□ -2.1
APOEP02649 COX6CP18-201ENST00000448769 222 ntBASIC1.94□□□□□ -2.1
APOEP02649 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.94□□□□□ -2.1
APOEP02649 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
APOEP02649 AC068781.1-201ENST00000488231 618 ntBASIC1.94□□□□□ -2.1
APOEP02649 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.94□□□□□ -2.1
APOEP02649 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 HMGB3P17-201ENST00000504195 649 ntBASIC1.94□□□□□ -2.1
APOEP02649 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.94□□□□□ -2.1
APOEP02649 AC098591.2-201ENST00000510152 315 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AC010186.2-204ENST00000537668 439 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AL132857.1-201ENST00000555180 708 ntBASIC1.94□□□□□ -2.1
APOEP02649 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AL049838.1-201ENST00000563647 981 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.94□□□□□ -2.1
APOEP02649 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.94□□□□□ -2.1
APOEP02649 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.94□□□□□ -2.1
APOEP02649 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.94□□□□□ -2.1
APOEP02649 AP001429.1-201ENST00000602568 530 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC068790.3-201ENST00000602988 553 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC098826.3-201ENST00000603823 466 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC004853.1-201ENST00000604902 698 ntBASIC1.94□□□□□ -2.1
APOEP02649 DBF4P1-201ENST00000412976 1892 ntBASIC1.94□□□□□ -2.1
APOEP02649 AC010329.5-201ENST00000623497 2174 ntBASIC1.93□□□□□ -2.1
APOEP02649 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.93□□□□□ -2.1
APOEP02649 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.93□□□□□ -2.1
APOEP02649 AL356292.1-201ENST00000283110 373 ntBASIC1.93□□□□□ -2.1
APOEP02649 RNA5SP125-201ENST00000364843 120 ntBASIC1.93□□□□□ -2.1
APOEP02649 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
APOEP02649 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
APOEP02649 MIR217-201ENST00000384817 110 ntBASIC1.93□□□□□ -2.1
APOEP02649 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
APOEP02649 U8.13-201ENST00000390842 128 ntBASIC1.93□□□□□ -2.1
APOEP02649 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
APOEP02649 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
APOEP02649 PPP1R11P2-201ENST00000423543 382 ntBASIC1.93□□□□□ -2.1
APOEP02649 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.93□□□□□ -2.1
APOEP02649 MTND2P5-201ENST00000432656 1006 ntBASIC1.93□□□□□ -2.1
APOEP02649 SDCBPP1-201ENST00000440192 890 ntBASIC1.93□□□□□ -2.1
APOEP02649 AL136380.1-201ENST00000447970 162 ntBASIC1.93□□□□□ -2.1
APOEP02649 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms