Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CPSF4O95639 AC087359.1-201ENST00000508335 1740 ntBASIC1.82□□□□□ -2.12
CPSF4O95639 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.82□□□□□ -2.12
CPSF4O95639 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CPSF4O95639 AC005832.2-201ENST00000538921 1430 ntBASIC1.82□□□□□ -2.12
CPSF4O95639 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 OR4G2P-202ENST00000641004 1759 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNU6-97P-201ENST00000363387 104 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNU6-270P-201ENST00000364131 105 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 SNORA67.1-201ENST00000364749 141 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 Y_RNA.465-201ENST00000384293 102 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNU6-1207P-201ENST00000384343 107 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 MIR514A1-201ENST00000385133 98 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CPSF4O95639 RNA5SP425-201ENST00000410336 112 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNU2-25P-201ENST00000411041 191 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNA5SP508-201ENST00000411327 119 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 MORF4L1P6-201ENST00000418771 268 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.81□□□□□ -2.12
CPSF4O95639 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.81□□□□□ -2.12
CPSF4O95639 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.81□□□□□ -2.12
CPSF4O95639 RPL21P134-201ENST00000453468 483 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 AL135752.1-201ENST00000479477 471 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC090096.1-201ENST00000489168 390 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC116353.3-201ENST00000511215 249 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC109445.1-201ENST00000512356 383 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 RNU6-928P-201ENST00000516876 104 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.81□□□□□ -2.12
CPSF4O95639 AP003497.1-201ENST00000528472 562 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.81□□□□□ -2.12
CPSF4O95639 AP002770.2-201ENST00000543613 532 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 OR11H5P-201ENST00000554039 926 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 AL049838.1-201ENST00000563647 981 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 AL353997.4-201ENST00000586196 166 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC004987.4-201ENST00000603383 338 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC068313.1-201ENST00000604028 1008 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC006270.3-201ENST00000605967 1036 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 AL157392.4-201ENST00000609756 345 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 AL603758.1-201ENST00000618654 241 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.81□□□□□ -2.12
CPSF4O95639 AC099654.9-201ENST00000637055 678 ntBASIC1.81□□□□□ -2.12
CPSF4O95639 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.81□□□□□ -2.12
CPSF4O95639 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.81□□□□□ -2.12
CPSF4O95639 TPTE2P4-201ENST00000258589 1605 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.8□□□□□ -2.12
CPSF4O95639 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.8□□□□□ -2.12
CPSF4O95639 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CPSF4O95639 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CPSF4O95639 AL161781.1-201ENST00000354277 403 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 RNU6-289P-201ENST00000364093 107 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 RNU4-68P-201ENST00000364314 141 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 RNU6-359P-201ENST00000365466 108 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 MIR325-201ENST00000385260 98 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 RNU2-2P-201ENST00000410396 191 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 RN7SKP223-201ENST00000410582 62 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 Z82209.1-201ENST00000422141 2135 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AL354692.1-201ENST00000423044 315 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 ZYG11AP1-201ENST00000430329 837 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.8□□□□□ -2.12
CPSF4O95639 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.8□□□□□ -2.12
CPSF4O95639 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.8□□□□□ -2.12
CPSF4O95639 FAM103A2P-201ENST00000444122 354 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.8□□□□□ -2.12
CPSF4O95639 EEF1E1P1-201ENST00000446998 430 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AL031313.1-201ENST00000448435 256 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 snoU13.28-201ENST00000459235 104 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 MEMO1P3-201ENST00000459811 302 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AC134050.1-201ENST00000495088 933 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.8□□□□□ -2.12
CPSF4O95639 RNU6-1256P-201ENST00000516539 103 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.8□□□□□ -2.12
CPSF4O95639 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.8□□□□□ -2.12
CPSF4O95639 AL132857.1-201ENST00000555180 708 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.8□□□□□ -2.12
CPSF4O95639 ANP32BP3-201ENST00000559213 706 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.8□□□□□ -2.12
CPSF4O95639 MIR4509-3-201ENST00000578671 94 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AC090616.3-201ENST00000582184 217 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 MIR4509-2-201ENST00000583920 94 ntBASIC1.8□□□□□ -2.12
CPSF4O95639 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.8□□□□□ -2.12
CPSF4O95639 AC245297.2-201ENST00000610119 565 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms