Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC099548.1-201ENST00000421443 426 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC098614.2-201ENST00000426040 255 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC007560.1-201ENST00000426912 237 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.21□□□□□ -2.06
SEMA3DO95025 RPS25P9-201ENST00000435591 252 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.21□□□□□ -2.06
SEMA3DO95025 RPL21P134-201ENST00000453468 483 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 FCF1P6-201ENST00000456841 595 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC126389.1-201ENST00000477436 290 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AL049873.1-201ENST00000480540 376 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC021382.1-201ENST00000483523 359 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 RN7SL636P-201ENST00000497504 294 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA3DO95025 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA3DO95025 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC027176.1-201ENST00000560204 514 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC026790.2-201ENST00000606282 430 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA3DO95025 AC103710.4-201ENST00000609301 899 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AL157392.4-201ENST00000609756 345 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC109809.1-201ENST00000619665 545 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 AC025034.2-201ENST00000623264 286 ntBASIC2.21□□□□□ -2.06
SEMA3DO95025 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA3DO95025 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.21□□□□□ -2.06
SEMA3DO95025 RPL21P132-201ENST00000331267 462 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 FTLP6-201ENST00000355274 422 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 RNU1-51P-201ENST00000365345 176 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 RNU6-744P-201ENST00000365557 107 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 RNU6-1316P-201ENST00000384242 108 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 Y_RNA.465-201ENST00000384293 102 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 RNU6-1242P-201ENST00000391052 103 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 USP9YP33-201ENST00000412220 421 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA3DO95025 Z85995.1-201ENST00000415547 335 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC009963.1-201ENST00000417265 157 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AL590383.1-201ENST00000428602 75 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 USP9YP35-201ENST00000435696 412 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AL714022.1-201ENST00000439897 151 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 MTND2P39-201ENST00000457230 764 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC116337.2-201ENST00000477662 156 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA3DO95025 MTND3P3-201ENST00000505004 126 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC109445.1-201ENST00000512356 383 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AP001646.1-201ENST00000527936 915 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AP002748.2-201ENST00000528671 348 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC004987.4-201ENST00000603383 338 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC245297.2-201ENST00000610119 565 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SEMA3DO95025 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC006386.1-201ENST00000619436 415 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC073308.1-201ENST00000623696 305 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC012640.5-201ENST00000623897 319 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AL445984.1-201ENST00000637834 659 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AL049641.1-201ENST00000441055 1948 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 AC007785.2-201ENST00000598627 1916 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SEMA3DO95025 MTND4P35-201ENST00000604257 1375 ntBASIC2.2□□□□□ -2.06
SEMA3DO95025 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SEMA3DO95025 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
SEMA3DO95025 AC011477.1-204ENST00000623416 1325 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SEMA3DO95025 AL596028.1-201ENST00000326971 197 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 SNORA23-201ENST00000365128 182 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 SNORA51.11-201ENST00000384442 131 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 Y_RNA.510-201ENST00000384511 114 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 SNORA67.4-201ENST00000384688 142 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 U3.20-201ENST00000390909 217 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AL591416.1-201ENST00000404015 867 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 MTCYBP38-201ENST00000417160 1123 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.19□□□□□ -2.06
SEMA3DO95025 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.19□□□□□ -2.06
SEMA3DO95025 RPS15AP28-201ENST00000435088 386 ntBASIC2.19□□□□□ -2.06
SEMA3DO95025 ATG12P2-201ENST00000456830 416 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms