Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.13□□□□□ -1.75
CDKL5O76039 AC093227.2-201ENST00000589357 285 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.13□□□□□ -1.75
CDKL5O76039 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.13□□□□□ -1.75
CDKL5O76039 AC119674.1-207ENST00000641355 633 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 AC090337.1-201ENST00000579651 2074 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL5O76039 AC007823.1-201ENST00000569932 1566 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL5O76039 Y_RNA.326-201ENST00000365176 113 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RNU1-64P-201ENST00000365443 163 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RNU6-692P-201ENST00000384496 107 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 MIR558-201ENST00000384920 94 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RNU6-510P-201ENST00000391239 108 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 TXNP7-201ENST00000406296 293 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RNU6ATAC-201ENST00000408749 126 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 Y_RNA.615-201ENST00000410769 117 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RN7SKP53-201ENST00000411337 315 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.12□□□□□ -1.75
CDKL5O76039 NDUFB4P5-201ENST00000415445 361 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC068533.1-201ENST00000418542 415 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 OR1AA1P-201ENST00000419597 916 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.12□□□□□ -1.75
CDKL5O76039 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.12□□□□□ -1.75
CDKL5O76039 AC005534.2-201ENST00000431047 433 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AL445584.1-201ENST00000431451 330 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RPS29P15-201ENST00000458329 171 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 MRPS17P3-201ENST00000465453 385 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC004062.1-201ENST00000509926 645 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 MTCO3P44-201ENST00000510977 541 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RNU4-49P-201ENST00000516080 140 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.12□□□□□ -1.75
CDKL5O76039 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CDKL5O76039 RPL21P12-201ENST00000559810 515 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC106785.1-201ENST00000565935 262 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC006116.10-201ENST00000591836 581 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC010591.1-201ENST00000603941 649 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AL133255.1-201ENST00000606374 441 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 MIR7851-201ENST00000610611 160 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC093913.1-201ENST00000614178 329 ntBASIC4.12□□□□□ -1.75
CDKL5O76039 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.12□□□□□ -1.75
CDKL5O76039 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL5O76039 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL5O76039 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL5O76039 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL5O76039 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL5O76039 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL5O76039 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDKL5O76039 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.12□□□□□ -1.75
CDKL5O76039 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.12□□□□□ -1.75
CDKL5O76039 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CDKL5O76039 AP001148.1-201ENST00000624124 2359 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.11□□□□□ -1.75
CDKL5O76039 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDKL5O76039 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.138-201ENST00000363462 102 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.162-201ENST00000363683 102 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.231-201ENST00000364358 102 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 U3.11-201ENST00000364476 212 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 Y_RNA.474-201ENST00000384341 102 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 MIR514A2-201ENST00000385131 88 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 MIR514A3-201ENST00000385132 88 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 MIR454-201ENST00000390180 115 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 SNORD37.1-201ENST00000390968 65 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 EI24P2-201ENST00000397776 1076 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RN7SKP202-201ENST00000410439 330 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RNU2-62P-201ENST00000410868 191 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RNU6-193P-201ENST00000410977 107 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RPL31P2-201ENST00000413849 377 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RPL30P2-201ENST00000414021 291 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RPL17P36-201ENST00000420302 549 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC018630.2-202ENST00000422992 927 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 MTATP6P16-201ENST00000434543 526 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC007389.2-201ENST00000434630 306 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC024082.2-201ENST00000434771 238 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 MTCYBP6-201ENST00000441810 138 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC108059.3-201ENST00000456388 214 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 SNRPGP3-201ENST00000469405 227 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC092451.1-201ENST00000480211 153 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.11□□□□□ -1.75
CDKL5O76039 RNU4-29P-201ENST00000515943 174 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 SNORA19.2-201ENST00000516013 114 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 RNU6-27P-201ENST00000516146 107 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC026333.2-201ENST00000542164 106 ntBASIC4.11□□□□□ -1.75
CDKL5O76039 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.11□□□□□ -1.75
CDKL5O76039 AC005668.1-201ENST00000571142 476 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms