Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
GPC4O75487 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GPC4O75487 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
GPC4O75487 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
GPC4O75487 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
GPC4O75487 MIR148B-201ENST00000362252 99 ntBASIC3.24□□□□□ -1.89
GPC4O75487 RNU6-282P-201ENST00000365357 103 ntBASIC3.24□□□□□ -1.89
GPC4O75487 Y_RNA.559-201ENST00000384686 107 ntBASIC3.24□□□□□ -1.89
GPC4O75487 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
GPC4O75487 AL663109.1-201ENST00000411498 844 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.24□□□□□ -1.89
GPC4O75487 AC007919.1-201ENST00000429380 217 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AL358934.1-201ENST00000432346 324 ntBASIC3.24□□□□□ -1.89
GPC4O75487 ARPC3P1-201ENST00000437218 533 ntBASIC3.24□□□□□ -1.89
GPC4O75487 MTCO2P7-201ENST00000446518 666 ntBASIC3.24□□□□□ -1.89
GPC4O75487 Z99127.3-201ENST00000448158 395 ntBASIC3.24□□□□□ -1.89
GPC4O75487 MTCYBP1-201ENST00000454315 1119 ntBASIC3.24□□□□□ -1.89
GPC4O75487 SNORD97-201ENST00000459187 142 ntBASIC3.24□□□□□ -1.89
GPC4O75487 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
GPC4O75487 SNORA31.3-201ENST00000516029 96 ntBASIC3.24□□□□□ -1.89
GPC4O75487 SCARNA24.1-201ENST00000516465 137 ntBASIC3.24□□□□□ -1.89
GPC4O75487 HMGB1P41-201ENST00000520234 440 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.24□□□□□ -1.89
GPC4O75487 AC011979.2-201ENST00000527568 352 ntBASIC3.24□□□□□ -1.89
GPC4O75487 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.24□□□□□ -1.89
GPC4O75487 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.24□□□□□ -1.89
GPC4O75487 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.24□□□□□ -1.89
GPC4O75487 GLUD1P4-201ENST00000590914 418 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC087683.1-201ENST00000591187 441 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC024220.1-201ENST00000603675 484 ntBASIC3.24□□□□□ -1.89
GPC4O75487 MIR98-201ENST00000606724 119 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AL161734.1-201ENST00000609720 557 ntBASIC3.24□□□□□ -1.89
GPC4O75487 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC002076.2-201ENST00000617362 122 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC099842.1-201ENST00000619919 596 ntBASIC3.24□□□□□ -1.89
GPC4O75487 AC068880.5-201ENST00000624331 290 ntBASIC3.24□□□□□ -1.89
GPC4O75487 MTND1P37-201ENST00000636562 264 ntBASIC3.24□□□□□ -1.89
GPC4O75487 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
GPC4O75487 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
GPC4O75487 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.24□□□□□ -1.89
GPC4O75487 AC110774.1-201ENST00000623567 2018 ntBASIC3.24□□□□□ -1.89
GPC4O75487 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 AC007785.2-201ENST00000598627 1916 ntBASIC3.23□□□□□ -1.89
GPC4O75487 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GPC4O75487 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GPC4O75487 RPS4XP3-201ENST00000398541 413 ntBASIC3.23□□□□□ -1.89
GPC4O75487 FAT1P1-201ENST00000406588 507 ntBASIC3.23□□□□□ -1.89
GPC4O75487 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GPC4O75487 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 TMEM167AP1-201ENST00000423409 219 ntBASIC3.23□□□□□ -1.89
GPC4O75487 RAC1P6-201ENST00000423911 575 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC137499.1-201ENST00000427602 88 ntBASIC3.23□□□□□ -1.89
GPC4O75487 OR2AS1P-201ENST00000427827 319 ntBASIC3.23□□□□□ -1.89
GPC4O75487 HMGB3P12-201ENST00000438745 556 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 AC115115.1-201ENST00000449927 248 ntBASIC3.23□□□□□ -1.89
GPC4O75487 KC877373.1-201ENST00000479066 408 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 RNU6-405P-201ENST00000516637 110 ntBASIC3.23□□□□□ -1.89
GPC4O75487 RNU6-1092P-201ENST00000516955 87 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC090572.1-201ENST00000519251 160 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
GPC4O75487 OR5G4P-201ENST00000525251 760 ntBASIC3.23□□□□□ -1.89
GPC4O75487 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GPC4O75487 AC087883.1-201ENST00000551882 391 ntBASIC3.23□□□□□ -1.89
GPC4O75487 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 AC011611.1-201ENST00000552179 197 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AL163153.1-201ENST00000554223 283 ntBASIC3.23□□□□□ -1.89
GPC4O75487 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 RPL21P12-201ENST00000559810 515 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 MIR3944-201ENST00000581277 108 ntBASIC3.23□□□□□ -1.89
GPC4O75487 NRBF2P1-201ENST00000587407 859 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 AC007363.1-201ENST00000604736 620 ntBASIC3.23□□□□□ -1.89
GPC4O75487 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 AP002360.4-201ENST00000606980 481 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC109347.2-201ENST00000610220 349 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
GPC4O75487 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 AL589994.2-201ENST00000621124 579 ntBASIC3.23□□□□□ -1.89
GPC4O75487 AC244100.1-202ENST00000621554 382 ntBASIC3.23□□□□□ -1.89
GPC4O75487 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
GPC4O75487 LRRC77P-213ENST00000637727 880 ntBASIC3.23□□□□□ -1.89
GPC4O75487 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.23□□□□□ -1.89
GPC4O75487 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GPC4O75487 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
GPC4O75487 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
GPC4O75487 HSPE1P11-201ENST00000339579 310 ntBASIC3.22□□□□□ -1.89
GPC4O75487 Y_RNA.22-201ENST00000362492 102 ntBASIC3.22□□□□□ -1.89
GPC4O75487 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms