Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 AC018437.1-201ENST00000492214 406 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC093281.2-201ENST00000510153 597 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 AC083899.3-201ENST00000603413 594 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AP000654.2-201ENST00000605633 586 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC008163.1-202ENST00000636004 2889 ntBASIC0.42□□□□□ -2.34
USH2AO75445 MTCO1P23-201ENST00000415223 1526 ntBASIC0.42□□□□□ -2.34
USH2AO75445 RNA5SP205-201ENST00000364653 136 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.42□□□□□ -2.34
USH2AO75445 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.42□□□□□ -2.34
USH2AO75445 SNORA31.25-201ENST00000517242 134 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 AC104997.1-201ENST00000519761 717 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC024619.4-201ENST00000580924 316 ntBASIC0.42□□□□□ -2.34
USH2AO75445 HMGN1P30-201ENST00000589286 268 ntBASIC0.42□□□□□ -2.34
USH2AO75445 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 DPRXP5-201ENST00000604662 539 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AL118508.4-201ENST00000624142 1176 ntBASIC0.42□□□□□ -2.34
USH2AO75445 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.42□□□□□ -2.34
USH2AO75445 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.42□□□□□ -2.34
USH2AO75445 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.42□□□□□ -2.34
USH2AO75445 LSM1P1-201ENST00000438629 273 ntBASIC0.42□□□□□ -2.34
USH2AO75445 DPPA3P1-201ENST00000448050 469 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.42□□□□□ -2.34
USH2AO75445 OR4R1P-201ENST00000529879 463 ntBASIC0.42□□□□□ -2.34
USH2AO75445 ZNF192P1-203ENST00000565888 810 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AC091932.3-201ENST00000624223 323 ntBASIC0.42□□□□□ -2.34
USH2AO75445 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC0.42□□□□□ -2.34
USH2AO75445 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
USH2AO75445 RPL23AP32-201ENST00000395315 459 ntBASIC0.41□□□□□ -2.34
USH2AO75445 CCNB2P1-201ENST00000399411 1150 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC0.41□□□□□ -2.34
USH2AO75445 snoU109.1-201ENST00000459339 135 ntBASIC0.41□□□□□ -2.34
USH2AO75445 RNU2-44P-201ENST00000516795 194 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.41□□□□□ -2.34
USH2AO75445 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.41□□□□□ -2.34
USH2AO75445 SNORD114-21-201ENST00000606412 72 ntBASIC0.41□□□□□ -2.34
USH2AO75445 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.41□□□□□ -2.34
USH2AO75445 RPS15AP7-201ENST00000439294 405 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
USH2AO75445 COX6CP18-201ENST00000448769 222 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC005908.1-201ENST00000468701 347 ntBASIC0.41□□□□□ -2.34
USH2AO75445 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.41□□□□□ -2.34
USH2AO75445 AC008427.1-201ENST00000503102 655 ntBASIC0.41□□□□□ -2.34
USH2AO75445 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.41□□□□□ -2.34
USH2AO75445 AC011890.2-201ENST00000613393 294 ntBASIC0.41□□□□□ -2.34
USH2AO75445 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.41□□□□□ -2.34
USH2AO75445 AC068787.1-201ENST00000623908 691 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC073264.1-201ENST00000411508 416 ntBASIC0.41□□□□□ -2.34
USH2AO75445 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.41□□□□□ -2.34
USH2AO75445 AC008962.1-201ENST00000605729 304 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC007792.1-201ENST00000623023 402 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC011155.1-201ENST00000316512 456 ntBASIC0.41□□□□□ -2.34
USH2AO75445 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.41□□□□□ -2.34
USH2AO75445 AL512661.1-201ENST00000434586 1253 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
USH2AO75445 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.41□□□□□ -2.34
USH2AO75445 OR5AQ1P-203ENST00000641818 1529 ntBASIC0.41□□□□□ -2.34
USH2AO75445 SNORA23-201ENST00000365128 182 ntBASIC0.41□□□□□ -2.34
USH2AO75445 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.41□□□□□ -2.34
USH2AO75445 GPM6BP3-201ENST00000442797 145 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC022431.1-201ENST00000450941 438 ntBASIC0.41□□□□□ -2.34
USH2AO75445 RNU6-56P-201ENST00000516986 93 ntBASIC0.41□□□□□ -2.34
USH2AO75445 OR5B19P-201ENST00000531766 928 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.41□□□□□ -2.34
USH2AO75445 MIR6835-201ENST00000621552 64 ntBASIC0.41□□□□□ -2.34
USH2AO75445 AL031601.2-202ENST00000622650 282 ntBASIC0.41□□□□□ -2.34
USH2AO75445 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.4□□□□□ -2.34
USH2AO75445 AL159152.1-201ENST00000635019 2587 ntBASIC0.4□□□□□ -2.34
USH2AO75445 RNU6-997P-201ENST00000384725 107 ntBASIC0.4□□□□□ -2.34
USH2AO75445 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.4□□□□□ -2.34
USH2AO75445 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.4□□□□□ -2.34
USH2AO75445 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.4□□□□□ -2.34
USH2AO75445 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.34
USH2AO75445 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.4□□□□□ -2.34
USH2AO75445 AC133485.1-201ENST00000567176 124 ntBASIC0.4□□□□□ -2.34
USH2AO75445 AC138907.6-201ENST00000568401 126 ntBASIC0.4□□□□□ -2.34
USH2AO75445 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.4□□□□□ -2.34
USH2AO75445 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.4□□□□□ -2.35
USH2AO75445 Y_RNA.288-201ENST00000364854 92 ntBASIC0.4□□□□□ -2.35
USH2AO75445 MIR513A1-201ENST00000385138 129 ntBASIC0.4□□□□□ -2.35
USH2AO75445 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.4□□□□□ -2.35
USH2AO75445 AL356776.1-201ENST00000406574 447 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AL096701.2-201ENST00000416920 238 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AP000949.1-201ENST00000438328 629 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.4□□□□□ -2.35
USH2AO75445 OR6K5P-201ENST00000447050 945 ntBASIC0.4□□□□□ -2.35
USH2AO75445 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.4□□□□□ -2.35
USH2AO75445 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.4□□□□□ -2.35
USH2AO75445 HMGB3P30-201ENST00000457863 606 ntBASIC0.4□□□□□ -2.35
USH2AO75445 MTCO2P9-201ENST00000503214 694 ntBASIC0.4□□□□□ -2.35
USH2AO75445 RNA5SP134-201ENST00000516492 96 ntBASIC0.4□□□□□ -2.35
USH2AO75445 EIF4A1P12-201ENST00000551910 141 ntBASIC0.4□□□□□ -2.35
USH2AO75445 ANP32BP3-201ENST00000559213 706 ntBASIC0.4□□□□□ -2.35
USH2AO75445 AC011330.2-201ENST00000621680 635 ntBASIC0.4□□□□□ -2.35
USH2AO75445 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.4□□□□□ -2.35
USH2AO75445 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
USH2AO75445 ELL2P3-201ENST00000457883 1602 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms