Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4BO75351 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS4BO75351 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4BO75351 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4BO75351 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.89□□□□□ -1.79
VPS4BO75351 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4BO75351 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS4BO75351 AC012182.1-201ENST00000570133 895 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 SNRPGP15-201ENST00000600149 222 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AL365204.3-201ENST00000612448 685 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 SDR42E1P2-201ENST00000614861 481 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AC039056.2-201ENST00000622261 511 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 C2orf27A-204ENST00000623058 969 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS4BO75351 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS4BO75351 AL353746.1-201ENST00000566293 6881 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AC004925.1-201ENST00000624256 2706 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 AC032011.1-201ENST00000611703 1549 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 MTND4P35-201ENST00000604257 1375 ntBASIC3.89□□□□□ -1.79
VPS4BO75351 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS4BO75351 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VPS4BO75351 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4BO75351 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4BO75351 Y_RNA.167-201ENST00000363735 109 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4BO75351 RNU6-701P-201ENST00000384059 107 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 RNU6-510P-201ENST00000391239 108 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 HMGN2P8-201ENST00000391458 268 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4BO75351 AL606923.1-201ENST00000406616 190 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 RNU4-46P-201ENST00000410818 138 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4BO75351 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC009161.1-201ENST00000417306 376 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4BO75351 CALM2P2-201ENST00000428512 440 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AL445584.1-201ENST00000431451 330 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 SNRPFP3-201ENST00000457792 225 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AP000873.1-201ENST00000463987 400 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4BO75351 Y_RNA.665-201ENST00000516177 98 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 RNA5SP309-201ENST00000516670 106 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 IGKV2D-23-201ENST00000518179 286 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4BO75351 ERHP1-201ENST00000523006 310 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4BO75351 AL137161.1-201ENST00000532231 390 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC087241.2-201ENST00000535801 324 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS4BO75351 RPS3AP23-202ENST00000574601 686 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 SNORD84-203ENST00000584275 78 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AL356055.1-201ENST00000602528 446 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC010133.1-201ENST00000615809 842 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS4BO75351 AC012314.7-201ENST00000619693 93 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AC009248.2-201ENST00000619826 254 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AL357559.1-201ENST00000622228 274 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS4BO75351 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4BO75351 FAM35DP-201ENST00000323387 2712 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4BO75351 MTND4P29-201ENST00000503122 1372 ntBASIC3.88□□□□□ -1.79
VPS4BO75351 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS4BO75351 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4BO75351 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4BO75351 Y_RNA.100-201ENST00000363141 102 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 RNA5SP235-201ENST00000365411 114 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 UBE2V1P2-201ENST00000397758 440 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AL356432.1-201ENST00000405809 419 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 Y_RNA.615-201ENST00000410769 117 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 EI24P1-201ENST00000416584 867 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC068533.1-201ENST00000418542 415 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 TOMM22P1-201ENST00000418578 312 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 ARL5AP1-201ENST00000418991 388 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS4BO75351 RPL35AP12-201ENST00000425362 338 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC091390.3-201ENST00000426478 338 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 RPL7L1P10-201ENST00000427790 463 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC024082.2-201ENST00000434771 238 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 TAAR7P-201ENST00000436141 242 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 RPL7P12-201ENST00000446719 750 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4BO75351 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS4BO75351 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4BO75351 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4BO75351 RPL21P99-201ENST00000480369 423 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS4BO75351 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 FAM206BP-201ENST00000510179 541 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4BO75351 RNU6-352P-201ENST00000516908 107 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 TRMT10BP1-201ENST00000519377 943 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC107953.1-201ENST00000522216 297 ntBASIC3.87□□□□□ -1.79
VPS4BO75351 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms