Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 Y_RNA.333-201ENST00000365274 102 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 SNORA54-201ENST00000384281 123 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 SNORD67-201ENST00000390833 111 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 C1DP2-201ENST00000418167 426 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 BTF3L4P3-201ENST00000418879 476 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 USP9YP36-201ENST00000424581 829 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AL512844.2-201ENST00000433990 593 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC073614.1-201ENST00000438690 650 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 MTCO2P29-201ENST00000465212 189 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 KC877373.1-201ENST00000479066 408 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 RNU2-10P-201ENST00000516375 211 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 RNU6-1220P-201ENST00000517126 108 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 RN7SKP258-201ENST00000517151 304 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC022616.3-201ENST00000523940 148 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC011979.2-201ENST00000527568 352 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 MIR4528-201ENST00000577763 90 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 BNIP3P22-201ENST00000593399 556 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.14□□□□□ -1.91
PRAMEF11O60813 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.14□□□□□ -1.91
PRAMEF11O60813 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PRAMEF11O60813 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 SNORD56.2-201ENST00000363242 71 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 RNU6-741P-201ENST00000383889 107 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 SNORA20.2-201ENST00000383922 131 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 RNU6-39P-201ENST00000384344 107 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 CDK8P2-201ENST00000415020 547 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 BX295541.1-201ENST00000417774 250 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 RAC1P6-201ENST00000423911 575 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 TRIAP1P1-201ENST00000427062 225 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC137499.1-201ENST00000427602 88 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 ARPC3P1-201ENST00000437218 533 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 HIGD1AP11-201ENST00000438361 280 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 SNORD97-201ENST00000459187 142 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 KLF3P2-201ENST00000465138 268 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 RPL7P5-201ENST00000471472 736 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 RPS20P22-201ENST00000473700 357 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRAMEF11O60813 MTCO3P28-201ENST00000513351 515 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC008885.1-201ENST00000514930 301 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AP006587.4-201ENST00000526053 529 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC012213.3-201ENST00000577199 777 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 MIR3167-201ENST00000579623 85 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC007619.2-201ENST00000605743 379 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC008498.1-201ENST00000613012 531 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL589994.2-201ENST00000621124 579 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 AC006111.3-201ENST00000622137 383 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRAMEF11O60813 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PRAMEF11O60813 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.13□□□□□ -1.91
PRAMEF11O60813 AL049641.1-201ENST00000441055 1948 ntBASIC3.13□□□□□ -1.91
PRAMEF11O60813 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.12□□□□□ -1.91
PRAMEF11O60813 TPTE2P4-201ENST00000258589 1605 ntBASIC3.12□□□□□ -1.91
PRAMEF11O60813 AC073325.2-201ENST00000339545 159 ntBASIC3.12□□□□□ -1.91
PRAMEF11O60813 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms