Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 Y_RNA.812-201ENST00000610788 101 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AL390240.1-201ENST00000612950 384 ntBASIC3.87□□□□□ -1.79
PROM1O43490 Y_RNA.784-201ENST00000613803 101 ntBASIC3.87□□□□□ -1.79
PROM1O43490 Y_RNA.787-201ENST00000616522 101 ntBASIC3.87□□□□□ -1.79
PROM1O43490 Y_RNA.780-201ENST00000617336 101 ntBASIC3.87□□□□□ -1.79
PROM1O43490 Y_RNA.801-201ENST00000619005 101 ntBASIC3.87□□□□□ -1.79
PROM1O43490 uc_338.11-201ENST00000619132 160 ntBASIC3.87□□□□□ -1.79
PROM1O43490 AL589994.2-201ENST00000621124 579 ntBASIC3.87□□□□□ -1.79
PROM1O43490 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.87□□□□□ -1.79
PROM1O43490 AL133216.2-202ENST00000634512 349 ntBASIC3.87□□□□□ -1.79
PROM1O43490 DDX10P1-201ENST00000448545 1933 ntBASIC3.87□□□□□ -1.79
PROM1O43490 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
PROM1O43490 OTUD4P1-201ENST00000237841 3067 ntBASIC3.86□□□□□ -1.79
PROM1O43490 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 API5P2-201ENST00000397055 1498 ntBASIC3.86□□□□□ -1.79
PROM1O43490 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.86□□□□□ -1.79
PROM1O43490 ZNF962P-201ENST00000443465 3140 ntBASIC3.86□□□□□ -1.79
PROM1O43490 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AL139276.1-201ENST00000311910 1001 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RNU6-600P-201ENST00000362524 99 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RNU6-61P-201ENST00000365528 109 ntBASIC3.86□□□□□ -1.79
PROM1O43490 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 Y_RNA.387-201ENST00000383918 102 ntBASIC3.86□□□□□ -1.79
PROM1O43490 Y_RNA.474-201ENST00000384341 102 ntBASIC3.86□□□□□ -1.79
PROM1O43490 Y_RNA.576-201ENST00000384781 102 ntBASIC3.86□□□□□ -1.79
PROM1O43490 MIR554-201ENST00000384874 96 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC108032.1-201ENST00000416706 207 ntBASIC3.86□□□□□ -1.79
PROM1O43490 ARL5AP1-201ENST00000418991 388 ntBASIC3.86□□□□□ -1.79
PROM1O43490 BEND7P1-201ENST00000422058 457 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RAC1P6-201ENST00000423911 575 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RPL7L1P10-201ENST00000427790 463 ntBASIC3.86□□□□□ -1.79
PROM1O43490 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.86□□□□□ -1.79
PROM1O43490 VDAC1P3-201ENST00000434069 851 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.86□□□□□ -1.79
PROM1O43490 HMGB3P11-201ENST00000440127 604 ntBASIC3.86□□□□□ -1.79
PROM1O43490 PRPS1P1-201ENST00000445305 876 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.86□□□□□ -1.79
PROM1O43490 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RPS24P6-201ENST00000452670 400 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.86□□□□□ -1.79
PROM1O43490 AC008481.1-201ENST00000463278 396 ntBASIC3.86□□□□□ -1.79
PROM1O43490 HMGN1P10-201ENST00000474557 553 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RPS27AP1-201ENST00000475545 471 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RPS4XP13-201ENST00000483219 789 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RPL29P14-201ENST00000495837 428 ntBASIC3.86□□□□□ -1.79
PROM1O43490 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
PROM1O43490 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.86□□□□□ -1.79
PROM1O43490 FAM206BP-201ENST00000510179 541 ntBASIC3.86□□□□□ -1.79
PROM1O43490 SNORA70.14-201ENST00000516205 110 ntBASIC3.86□□□□□ -1.79
PROM1O43490 RNU6-390P-201ENST00000516259 103 ntBASIC3.86□□□□□ -1.79
PROM1O43490 IGKV2-38-201ENST00000517443 247 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.86□□□□□ -1.79
PROM1O43490 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.86□□□□□ -1.79
PROM1O43490 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.86□□□□□ -1.79
PROM1O43490 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.86□□□□□ -1.79
PROM1O43490 AL118558.2-201ENST00000556294 238 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.86□□□□□ -1.79
PROM1O43490 AC024619.4-201ENST00000580924 316 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC104662.1-201ENST00000604448 511 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC113139.1-201ENST00000605049 239 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AL034351.1-201ENST00000605288 668 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AL022345.1-201ENST00000607292 135 ntBASIC3.86□□□□□ -1.79
PROM1O43490 AC092807.2-201ENST00000609367 243 ntBASIC3.86□□□□□ -1.79
PROM1O43490 TUG1_2.1-201ENST00000614234 87 ntBASIC3.86□□□□□ -1.79
PROM1O43490 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.86□□□□□ -1.79
PROM1O43490 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PROM1O43490 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 AF127577.6-201ENST00000623352 2191 ntBASIC3.86□□□□□ -1.79
PROM1O43490 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.86□□□□□ -1.79
PROM1O43490 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
PROM1O43490 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PROM1O43490 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.86□□□□□ -1.79
PROM1O43490 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.86□□□□□ -1.79
PROM1O43490 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PROM1O43490 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.85□□□□□ -1.79
PROM1O43490 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PROM1O43490 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
PROM1O43490 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PROM1O43490 AL365440.1-201ENST00000436135 2167 ntBASIC3.85□□□□□ -1.79
PROM1O43490 LINC02471-203ENST00000641941 4752 ntBASIC3.85□□□□□ -1.79
PROM1O43490 RNU6-1284P-201ENST00000363701 100 ntBASIC3.85□□□□□ -1.79
PROM1O43490 RNU6-522P-201ENST00000364497 107 ntBASIC3.85□□□□□ -1.79
PROM1O43490 Y_RNA.378-201ENST00000365652 113 ntBASIC3.85□□□□□ -1.79
PROM1O43490 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PROM1O43490 RNU6-692P-201ENST00000384496 107 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.85□□□□□ -1.79
PROM1O43490 RPL36AP6-201ENST00000435770 321 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AL356535.1-201ENST00000440335 398 ntBASIC3.85□□□□□ -1.79
PROM1O43490 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.85□□□□□ -1.79
PROM1O43490 AL358232.1-201ENST00000448030 501 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms