Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF3O43395 DPPA3P1-201ENST00000448050 469 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF3O43395 RNU6-261P-201ENST00000459506 102 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 RN7SL594P-201ENST00000470590 287 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.1□□□□□ -1.75
PRPF3O43395 AC019235.1-201ENST00000503847 207 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF3O43395 AF213884.2-201ENST00000510417 903 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 RNU2-27P-201ENST00000516185 142 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 RNU6-143P-201ENST00000516942 93 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AC026333.2-201ENST00000542164 106 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.1□□□□□ -1.75
PRPF3O43395 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.1□□□□□ -1.75
PRPF3O43395 AL391261.4-201ENST00000616012 481 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AL138880.2-201ENST00000616214 239 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AC139792.3-201ENST00000623525 224 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 AL034408.1-202ENST00000636088 415 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 ZNF680P1-201ENST00000436625 1469 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF3O43395 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRPF3O43395 MFSD8-233ENST00000641482 4860 ntBASIC4.1□□□□□ -1.75
PRPF3O43395 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF3O43395 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
PRPF3O43395 RN7SKP285-201ENST00000410137 318 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.09□□□□□ -1.75
PRPF3O43395 MRPL50P2-201ENST00000416821 482 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF3O43395 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF3O43395 AC002075.2-201ENST00000425207 252 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC006946.1-201ENST00000429106 328 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF3O43395 MTATP6P16-201ENST00000434543 526 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF3O43395 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF3O43395 MRPS17P3-201ENST00000465453 385 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 TRBV1-201ENST00000476502 284 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF3O43395 AC009646.1-201ENST00000510455 318 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.09□□□□□ -1.75
PRPF3O43395 Y_RNA.693-201ENST00000516641 110 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC026403.1-201ENST00000518938 295 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.09□□□□□ -1.75
PRPF3O43395 ADI1P3-201ENST00000549509 470 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.09□□□□□ -1.75
PRPF3O43395 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF3O43395 AC025449.1-201ENST00000603896 529 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC092954.2-201ENST00000609103 430 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 AC025034.2-201ENST00000623264 286 ntBASIC4.09□□□□□ -1.75
PRPF3O43395 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.09□□□□□ -1.75
PRPF3O43395 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF3O43395 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PRPF3O43395 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRPF3O43395 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
PRPF3O43395 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PRPF3O43395 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 FRG1CP-201ENST00000358464 769 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 RNU6-1167P-201ENST00000363227 94 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 Y_RNA.372-201ENST00000365599 102 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 Y_RNA.554-201ENST00000384672 102 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 Y_RNA.573-201ENST00000384763 105 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 MIR1-2-201ENST00000384961 85 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 API5P2-201ENST00000397055 1498 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 RPS4XP3-201ENST00000398541 413 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 CALM2P3-201ENST00000400429 449 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AL159169.1-201ENST00000421119 127 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AC092047.1-201ENST00000424997 240 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF3O43395 PIGFP3-201ENST00000441918 722 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 RPS29P31-201ENST00000446147 164 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AL590664.1-201ENST00000448065 339 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 U3.44-201ENST00000458938 192 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 RNU7-63P-201ENST00000459054 62 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 AC108078.2-201ENST00000510750 236 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AC011352.1-201ENST00000512300 793 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.08□□□□□ -1.76
PRPF3O43395 RANP3-201ENST00000530970 276 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRPF3O43395 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.08□□□□□ -1.76
PRPF3O43395 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF3O43395 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 AL121992.2-201ENST00000606262 256 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.08□□□□□ -1.76
PRPF3O43395 U4.6-201ENST00000621618 127 ntBASIC4.08□□□□□ -1.76
PRPF3O43395 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF3O43395 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF3O43395 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms