Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR6130-201ENST00000619419 109 ntBASIC2.76□□□□□ -1.97
PHF1O43189 PISRT1-201ENST00000626175 531 ntBASIC2.76□□□□□ -1.97
PHF1O43189 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.76□□□□□ -1.97
PHF1O43189 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PHF1O43189 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.76□□□□□ -1.97
PHF1O43189 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.76□□□□□ -1.97
PHF1O43189 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PHF1O43189 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.76□□□□□ -1.97
PHF1O43189 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.75□□□□□ -1.97
PHF1O43189 AL356274.2-201ENST00000624379 3752 ntBASIC2.75□□□□□ -1.97
PHF1O43189 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PHF1O43189 Y_RNA.517-201ENST00000384551 106 ntBASIC2.75□□□□□ -1.97
PHF1O43189 RNU4-47P-201ENST00000410876 114 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AL589872.1-201ENST00000426602 288 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.75□□□□□ -1.97
PHF1O43189 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.75□□□□□ -1.97
PHF1O43189 RPL22P17-201ENST00000438729 315 ntBASIC2.75□□□□□ -1.97
PHF1O43189 RABEPKP1-201ENST00000440529 1026 ntBASIC2.75□□□□□ -1.97
PHF1O43189 ELOCP30-201ENST00000447108 299 ntBASIC2.75□□□□□ -1.97
PHF1O43189 snoU13.4-201ENST00000458916 104 ntBASIC2.75□□□□□ -1.97
PHF1O43189 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AC105252.1-201ENST00000503089 286 ntBASIC2.75□□□□□ -1.97
PHF1O43189 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.75□□□□□ -1.97
PHF1O43189 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.75□□□□□ -1.97
PHF1O43189 RN7SKP298-201ENST00000515950 94 ntBASIC2.75□□□□□ -1.97
PHF1O43189 Y_RNA.672-201ENST00000516289 104 ntBASIC2.75□□□□□ -1.97
PHF1O43189 RNU1-143P-201ENST00000516296 146 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AP003181.2-201ENST00000528941 181 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.75□□□□□ -1.97
PHF1O43189 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.75□□□□□ -1.97
PHF1O43189 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.75□□□□□ -1.97
PHF1O43189 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.75□□□□□ -1.97
PHF1O43189 MIR3913-1-201ENST00000577744 102 ntBASIC2.75□□□□□ -1.97
PHF1O43189 MIR3118-1-201ENST00000581787 76 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.75□□□□□ -1.97
PHF1O43189 BDH2P1-201ENST00000602288 736 ntBASIC2.75□□□□□ -1.97
PHF1O43189 BNIP3P10-201ENST00000605360 577 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AC103710.1-201ENST00000610003 901 ntBASIC2.75□□□□□ -1.97
PHF1O43189 U1.23-201ENST00000610293 146 ntBASIC2.75□□□□□ -1.97
PHF1O43189 RNU1-68P-201ENST00000615382 146 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AC099842.1-201ENST00000619919 596 ntBASIC2.75□□□□□ -1.97
PHF1O43189 SNORD39.4-201ENST00000620099 78 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AC136475.10-201ENST00000620253 385 ntBASIC2.75□□□□□ -1.97
PHF1O43189 U1.39-201ENST00000621562 146 ntBASIC2.75□□□□□ -1.97
PHF1O43189 AC103988.1-201ENST00000566382 2177 ntBASIC2.75□□□□□ -1.97
PHF1O43189 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
PHF1O43189 AC092447.7-201ENST00000422212 1621 ntBASIC2.75□□□□□ -1.97
PHF1O43189 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.74□□□□□ -1.97
PHF1O43189 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PHF1O43189 Y_RNA.3-201ENST00000362331 103 ntBASIC2.74□□□□□ -1.97
PHF1O43189 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.74□□□□□ -1.97
PHF1O43189 MIR135A2-201ENST00000384854 100 ntBASIC2.74□□□□□ -1.97
PHF1O43189 FCF1P10-201ENST00000407590 479 ntBASIC2.74□□□□□ -1.97
PHF1O43189 MTND3P17-201ENST00000416968 344 ntBASIC2.74□□□□□ -1.97
PHF1O43189 BEND7P1-201ENST00000422058 457 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 MTND1P12-201ENST00000455231 147 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.74□□□□□ -1.97
PHF1O43189 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 AC004062.1-201ENST00000509926 645 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC105914.1-201ENST00000511798 226 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 SNORA18.6-201ENST00000516792 115 ntBASIC2.74□□□□□ -1.97
PHF1O43189 RNU6-430P-201ENST00000517078 107 ntBASIC2.74□□□□□ -1.97
PHF1O43189 SCARNA20.6-201ENST00000517251 106 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.74□□□□□ -1.97
PHF1O43189 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 AC107934.1-201ENST00000522215 217 ntBASIC2.74□□□□□ -1.97
PHF1O43189 HIGD1AP1-201ENST00000550979 275 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AL121603.1-201ENST00000553815 142 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.74□□□□□ -1.97
PHF1O43189 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.74□□□□□ -1.97
PHF1O43189 AC087481.2-201ENST00000565492 330 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 MIR3682-201ENST00000581338 84 ntBASIC2.74□□□□□ -1.97
PHF1O43189 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.74□□□□□ -1.97
PHF1O43189 NRBF2P1-201ENST00000587407 859 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AP003465.2-201ENST00000602571 373 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC073648.5-201ENST00000603502 305 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AL161729.4-201ENST00000604650 476 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC098614.4-201ENST00000607601 462 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AL591516.1-201ENST00000611326 274 ntBASIC2.74□□□□□ -1.97
PHF1O43189 uc_338.1-201ENST00000612113 180 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC013476.2-201ENST00000614456 459 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC091834.1-201ENST00000614543 472 ntBASIC2.74□□□□□ -1.97
PHF1O43189 ATP5A1P2-202ENST00000616464 443 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AL356321.1-201ENST00000621360 228 ntBASIC2.74□□□□□ -1.97
PHF1O43189 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.74□□□□□ -1.97
PHF1O43189 AC091953.2-201ENST00000623979 160 ntBASIC2.74□□□□□ -1.97
PHF1O43189 AC091903.1-201ENST00000624322 454 ntBASIC2.74□□□□□ -1.97
PHF1O43189 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.74□□□□□ -1.97
PHF1O43189 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.74□□□□□ -1.97
PHF1O43189 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.74□□□□□ -1.97
PHF1O43189 MTND5P26-201ENST00000426018 1752 ntBASIC2.74□□□□□ -1.97
PHF1O43189 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
PHF1O43189 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms