Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AL136116.1-201ENST00000403591 381 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SMAD9O15198 RNU2-39P-201ENST00000410604 198 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.17□□□□□ -1.9
SMAD9O15198 DPPA2P1-201ENST00000428060 556 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 MED13P1-201ENST00000428342 171 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 HMGB3P12-201ENST00000438745 556 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 MTCYBP1-201ENST00000454315 1119 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 RPL37P6-201ENST00000460682 294 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC084357.1-201ENST00000473404 255 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC011825.1-201ENST00000484967 388 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC006445.2-201ENST00000510061 472 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 RNU6-410P-201ENST00000517006 107 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.17□□□□□ -1.9
SMAD9O15198 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.17□□□□□ -1.9
SMAD9O15198 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 AC022880.1-201ENST00000534017 973 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.17□□□□□ -1.9
SMAD9O15198 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 MIR4738-201ENST00000579134 87 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.17□□□□□ -1.9
SMAD9O15198 AC007363.1-201ENST00000604736 620 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 U3.45-201ENST00000607547 219 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC096577.2-201ENST00000611455 153 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 U4.6-201ENST00000621618 127 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 AC007998.5-201ENST00000622938 237 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 OR5H6-203ENST00000642105 978 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
SMAD9O15198 MTCO1P12-201ENST00000414273 1543 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 RIOK3P1-201ENST00000418778 1528 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 MTND5P26-201ENST00000426018 1752 ntBASIC3.17□□□□□ -1.9
SMAD9O15198 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SMAD9O15198 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD9O15198 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD9O15198 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD9O15198 RNA5SP72-201ENST00000364442 117 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD9O15198 RNU6-946P-201ENST00000383878 107 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 SNORA1.3-201ENST00000384676 136 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 RNA5SP252-201ENST00000391131 119 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 GSTA9P-201ENST00000406231 611 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 MTCO2P11-201ENST00000431069 680 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 AL512844.2-201ENST00000433990 593 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AL451074.3-201ENST00000437709 472 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC079781.2-201ENST00000446424 169 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC023598.1-201ENST00000472521 361 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 KC877373.1-201ENST00000479066 408 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC023194.1-201ENST00000493084 308 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 MTND4LP22-201ENST00000508209 276 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC117522.1-201ENST00000509821 380 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC091133.4-201ENST00000511142 308 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 ATP5F1P5-201ENST00000526403 760 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC103843.2-201ENST00000530523 682 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 SUB1P2-201ENST00000556401 297 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC034105.3-201ENST00000565294 442 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC005951.1-201ENST00000576706 485 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 MIR3922-201ENST00000585192 84 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC067852.3-201ENST00000589177 561 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.16□□□□□ -1.9
SMAD9O15198 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 AL133393.1-201ENST00000603277 287 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.16□□□□□ -1.9
SMAD9O15198 Z84480.1-201ENST00000605131 311 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC084782.3-201ENST00000612282 578 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.16□□□□□ -1.9
SMAD9O15198 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.16□□□□□ -1.9
SMAD9O15198 AC084035.1-201ENST00000634543 607 ntBASIC3.16□□□□□ -1.9
SMAD9O15198 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD9O15198 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD9O15198 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.16□□□□□ -1.9
SMAD9O15198 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD9O15198 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
SMAD9O15198 TPTE2P4-201ENST00000258589 1605 ntBASIC3.15□□□□□ -1.9
SMAD9O15198 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SMAD9O15198 AC032011.1-201ENST00000611703 1549 ntBASIC3.15□□□□□ -1.9
SMAD9O15198 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.15□□□□□ -1.9
SMAD9O15198 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SMAD9O15198 SRP72P2-201ENST00000344851 1979 ntBASIC3.15□□□□□ -1.91
SMAD9O15198 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMAD9O15198 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMAD9O15198 FRG1CP-201ENST00000358464 769 ntBASIC3.15□□□□□ -1.91
SMAD9O15198 Y_RNA.22-201ENST00000362492 102 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms