Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.12□□□□□ -1.91
TO15178 OR5G4P-201ENST00000525251 760 ntBASIC3.12□□□□□ -1.91
TO15178 ATP5F1P5-201ENST00000526403 760 ntBASIC3.12□□□□□ -1.91
TO15178 AC011602.1-201ENST00000546484 331 ntBASIC3.12□□□□□ -1.91
TO15178 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.12□□□□□ -1.91
TO15178 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.12□□□□□ -1.91
TO15178 RPS3AP4-201ENST00000555161 764 ntBASIC3.12□□□□□ -1.91
TO15178 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.12□□□□□ -1.91
TO15178 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.12□□□□□ -1.91
TO15178 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.12□□□□□ -1.91
TO15178 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.12□□□□□ -1.91
TO15178 AGGF1P4-201ENST00000568249 801 ntBASIC3.12□□□□□ -1.91
TO15178 AL391840.1-201ENST00000571144 367 ntBASIC3.12□□□□□ -1.91
TO15178 AC091805.2-201ENST00000603848 235 ntBASIC3.12□□□□□ -1.91
TO15178 AC013553.2-201ENST00000604244 589 ntBASIC3.12□□□□□ -1.91
TO15178 NUTF2P8-201ENST00000604593 363 ntBASIC3.12□□□□□ -1.91
TO15178 Z99129.1-201ENST00000612510 255 ntBASIC3.12□□□□□ -1.91
TO15178 U6.105-201ENST00000637379 88 ntBASIC3.12□□□□□ -1.91
TO15178 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
TO15178 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
TO15178 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TO15178 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.12□□□□□ -1.91
TO15178 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
TO15178 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TO15178 CR848007.1-201ENST00000442354 1699 ntBASIC3.11□□□□□ -1.91
TO15178 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TO15178 RNU6-960P-201ENST00000364056 120 ntBASIC3.11□□□□□ -1.91
TO15178 RNA5SP139-201ENST00000364340 117 ntBASIC3.11□□□□□ -1.91
TO15178 RNU6-169P-201ENST00000365336 107 ntBASIC3.11□□□□□ -1.91
TO15178 SNORD116-4-201ENST00000384733 96 ntBASIC3.11□□□□□ -1.91
TO15178 MIR490-201ENST00000384865 128 ntBASIC3.11□□□□□ -1.91
TO15178 Y_RNA.582-201ENST00000391023 95 ntBASIC3.11□□□□□ -1.91
TO15178 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
TO15178 AC126124.2-201ENST00000413542 321 ntBASIC3.11□□□□□ -1.91
TO15178 ZNF90P2-204ENST00000419323 1075 ntBASIC3.11□□□□□ -1.91
TO15178 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 AC012498.1-201ENST00000424037 437 ntBASIC3.11□□□□□ -1.91
TO15178 OR2AS1P-201ENST00000427827 319 ntBASIC3.11□□□□□ -1.91
TO15178 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 USP9YP14-201ENST00000430663 563 ntBASIC3.11□□□□□ -1.91
TO15178 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
TO15178 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 MTATP6P30-201ENST00000443540 664 ntBASIC3.11□□□□□ -1.91
TO15178 CYCSP35-201ENST00000451978 304 ntBASIC3.11□□□□□ -1.91
TO15178 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.11□□□□□ -1.91
TO15178 AC034236.1-201ENST00000469891 373 ntBASIC3.11□□□□□ -1.91
TO15178 RPS20P22-201ENST00000473700 357 ntBASIC3.11□□□□□ -1.91
TO15178 RN7SL442P-201ENST00000473804 320 ntBASIC3.11□□□□□ -1.91
TO15178 AC082651.2-201ENST00000496833 166 ntBASIC3.11□□□□□ -1.91
TO15178 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.11□□□□□ -1.91
TO15178 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 RNU6-927P-201ENST00000516199 100 ntBASIC3.11□□□□□ -1.91
TO15178 RNU6-1092P-201ENST00000516955 87 ntBASIC3.11□□□□□ -1.91
TO15178 RNA5SP291-201ENST00000517222 105 ntBASIC3.11□□□□□ -1.91
TO15178 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TO15178 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.11□□□□□ -1.91
TO15178 GLUD1P4-201ENST00000590914 418 ntBASIC3.11□□□□□ -1.91
TO15178 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.11□□□□□ -1.91
TO15178 AP002360.4-201ENST00000606980 481 ntBASIC3.11□□□□□ -1.91
TO15178 AC019176.2-201ENST00000611579 315 ntBASIC3.11□□□□□ -1.91
TO15178 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
TO15178 AC099842.1-201ENST00000619919 596 ntBASIC3.11□□□□□ -1.91
TO15178 AL356321.1-201ENST00000621360 228 ntBASIC3.11□□□□□ -1.91
TO15178 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.11□□□□□ -1.91
TO15178 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TO15178 API5P2-201ENST00000397055 1498 ntBASIC3.1□□□□□ -1.91
TO15178 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TO15178 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
TO15178 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TO15178 AC073343.1-201ENST00000328239 651 ntBASIC3.1□□□□□ -1.91
TO15178 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TO15178 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TO15178 RNU6-741P-201ENST00000383889 107 ntBASIC3.1□□□□□ -1.91
TO15178 RNU6-701P-201ENST00000384059 107 ntBASIC3.1□□□□□ -1.91
TO15178 MIR7-3-201ENST00000384898 110 ntBASIC3.1□□□□□ -1.91
TO15178 RNU6-55P-201ENST00000411092 107 ntBASIC3.1□□□□□ -1.91
TO15178 RNU6-954P-201ENST00000411355 107 ntBASIC3.1□□□□□ -1.91
TO15178 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.1□□□□□ -1.91
TO15178 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.1□□□□□ -1.91
TO15178 AC133104.1-201ENST00000429100 218 ntBASIC3.1□□□□□ -1.91
TO15178 AC097713.2-201ENST00000430199 356 ntBASIC3.1□□□□□ -1.91
TO15178 AC092573.2-201ENST00000434546 243 ntBASIC3.1□□□□□ -1.91
TO15178 PRDX3P3-201ENST00000447765 522 ntBASIC3.1□□□□□ -1.91
TO15178 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.1□□□□□ -1.91
TO15178 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.1□□□□□ -1.91
TO15178 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 TPTE2P5-203ENST00000458118 728 ntBASIC3.1□□□□□ -1.91
TO15178 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
TO15178 AC004924.1-201ENST00000480160 781 ntBASIC3.1□□□□□ -1.91
TO15178 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TO15178 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.1□□□□□ -1.91
TO15178 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.1□□□□□ -1.91
TO15178 HMGB1P41-201ENST00000520234 440 ntBASIC3.1□□□□□ -1.91
TO15178 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms