Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATP2A1O14983 DEFB108F-201ENST00000344638 222 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ATP2A1O14983 RNU6-348P-201ENST00000384386 107 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 SNORA48.8-201ENST00000391324 134 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.42□□□□□ -1.86
ATP2A1O14983 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.42□□□□□ -1.86
ATP2A1O14983 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 ELOCP30-201ENST00000447108 299 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.42□□□□□ -1.86
ATP2A1O14983 MTND1P3-201ENST00000484956 952 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 RN7SL20P-201ENST00000488827 297 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 RPS15AP36-201ENST00000492022 382 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATP2A1O14983 NDUFB4P2-201ENST00000509515 391 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC109464.2-201ENST00000510242 943 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC105914.1-201ENST00000511798 226 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.42□□□□□ -1.86
ATP2A1O14983 RNA5SP356-201ENST00000515972 94 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.42□□□□□ -1.86
ATP2A1O14983 MIR3162-201ENST00000581818 82 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC103987.3-201ENST00000582071 292 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 BDH2P1-201ENST00000602288 736 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC090578.1-201ENST00000604955 591 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.42□□□□□ -1.86
ATP2A1O14983 AC091304.9-201ENST00000612091 226 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 AC095031.1-201ENST00000623685 672 ntBASIC3.42□□□□□ -1.86
ATP2A1O14983 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATP2A1O14983 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATP2A1O14983 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATP2A1O14983 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATP2A1O14983 SDAD1P2-201ENST00000441308 2028 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 FARSBP1-201ENST00000435808 1778 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP2A1O14983 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATP2A1O14983 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATP2A1O14983 U8.3-201ENST00000363321 132 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 RNY4P16-201ENST00000364768 94 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 SNORA23-201ENST00000365128 182 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 RNU6-1119P-201ENST00000384349 108 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 Y_RNA.559-201ENST00000384686 107 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 DEFB108C-201ENST00000400154 252 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 RNU2-8P-201ENST00000410727 190 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AL663109.1-201ENST00000411498 844 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATP2A1O14983 UBE2FP1-201ENST00000416536 447 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AL645937.1-202ENST00000421799 937 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AL589872.1-201ENST00000426602 288 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC022018.1-201ENST00000430685 241 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP2A1O14983 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.41□□□□□ -1.86
ATP2A1O14983 AL031667.1-201ENST00000440222 725 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC005094.1-201ENST00000440420 368 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC244505.5-201ENST00000443639 207 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP2A1O14983 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.41□□□□□ -1.86
ATP2A1O14983 RPL23AP94-201ENST00000512518 302 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 OR5G4P-201ENST00000525251 760 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP2A1O14983 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.41□□□□□ -1.86
ATP2A1O14983 GTF3AP2-201ENST00000557014 266 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.41□□□□□ -1.86
ATP2A1O14983 AC105224.1-201ENST00000587055 421 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 DUXAP4-201ENST00000603046 613 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AL451064.1-201ENST00000607718 471 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC103710.1-201ENST00000610003 901 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC007318.2-201ENST00000620999 243 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC005858.4-201ENST00000623191 700 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 PISRT1-201ENST00000626175 531 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 SNORA50A-202ENST00000629536 136 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
ATP2A1O14983 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATP2A1O14983 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.41□□□□□ -1.86
ATP2A1O14983 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ATP2A1O14983 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.4□□□□□ -1.86
ATP2A1O14983 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.4□□□□□ -1.86
ATP2A1O14983 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATP2A1O14983 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.86
ATP2A1O14983 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATP2A1O14983 Y_RNA.359-201ENST00000365498 102 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATP2A1O14983 AL031121.1-201ENST00000406553 254 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 RNU2-62P-201ENST00000410868 191 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 ELOCP17-201ENST00000414751 326 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AC019097.1-201ENST00000424783 735 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.4□□□□□ -1.87
ATP2A1O14983 AC009961.2-201ENST00000435771 251 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 MTCO3P45-201ENST00000443036 613 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.4□□□□□ -1.87
ATP2A1O14983 TPTE2P5-203ENST00000458118 728 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.4□□□□□ -1.87
ATP2A1O14983 MTCO2P29-201ENST00000465212 189 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 HSPE1P6-201ENST00000479457 291 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AC091435.1-201ENST00000505442 584 ntBASIC3.4□□□□□ -1.87
ATP2A1O14983 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms