Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
CHD1O14646 MIR532-201ENST00000385025 91 ntBASIC1.72□□□□□ -2.13
CHD1O14646 AL606495.1-201ENST00000422100 813 ntBASIC1.72□□□□□ -2.13
CHD1O14646 AC007560.1-201ENST00000426912 237 ntBASIC1.72□□□□□ -2.13
CHD1O14646 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.72□□□□□ -2.13
CHD1O14646 RPL31P20-201ENST00000449593 360 ntBASIC1.72□□□□□ -2.13
CHD1O14646 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
CHD1O14646 AC004062.1-201ENST00000509926 645 ntBASIC1.72□□□□□ -2.13
CHD1O14646 IMMP1LP2-201ENST00000552954 492 ntBASIC1.72□□□□□ -2.13
CHD1O14646 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.72□□□□□ -2.13
CHD1O14646 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.72□□□□□ -2.13
CHD1O14646 RNU6-697P-201ENST00000363348 107 ntBASIC1.71□□□□□ -2.13
CHD1O14646 SNORD114-23-201ENST00000363536 72 ntBASIC1.71□□□□□ -2.13
CHD1O14646 EZH2P1-201ENST00000431167 291 ntBASIC1.71□□□□□ -2.13
CHD1O14646 RPS27P1-201ENST00000450552 247 ntBASIC1.71□□□□□ -2.13
CHD1O14646 AC110792.2-201ENST00000510278 224 ntBASIC1.71□□□□□ -2.13
CHD1O14646 BTF3P12-201ENST00000519620 469 ntBASIC1.71□□□□□ -2.13
CHD1O14646 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.71□□□□□ -2.13
CHD1O14646 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.71□□□□□ -2.13
CHD1O14646 AC110079.1-202ENST00000635213 138 ntBASIC1.71□□□□□ -2.13
CHD1O14646 MTND5P10-201ENST00000603719 1809 ntBASIC1.71□□□□□ -2.13
CHD1O14646 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.71□□□□□ -2.14
CHD1O14646 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.71□□□□□ -2.14
CHD1O14646 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.71□□□□□ -2.14
CHD1O14646 SNORA31.20-201ENST00000517111 133 ntBASIC1.71□□□□□ -2.14
CHD1O14646 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.71□□□□□ -2.14
CHD1O14646 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.71□□□□□ -2.14
CHD1O14646 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.71□□□□□ -2.14
CHD1O14646 AC107214.2-201ENST00000608204 634 ntBASIC1.71□□□□□ -2.14
CHD1O14646 AC055764.2-201ENST00000610089 670 ntBASIC1.71□□□□□ -2.14
CHD1O14646 AC005332.10-201ENST00000612725 619 ntBASIC1.71□□□□□ -2.14
CHD1O14646 SDR42E1P2-201ENST00000614861 481 ntBASIC1.71□□□□□ -2.14
CHD1O14646 AC007742.2-201ENST00000618226 398 ntBASIC1.71□□□□□ -2.14
CHD1O14646 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
CHD1O14646 AC015726.3-201ENST00000624501 418 ntBASIC1.71□□□□□ -2.14
CHD1O14646 MTND4P27-201ENST00000450813 1354 ntBASIC1.71□□□□□ -2.14
CHD1O14646 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.71□□□□□ -2.14
CHD1O14646 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CHD1O14646 MIR320B1-201ENST00000390209 79 ntBASIC1.7□□□□□ -2.14
CHD1O14646 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.7□□□□□ -2.14
CHD1O14646 AL591704.1-201ENST00000432574 275 ntBASIC1.7□□□□□ -2.14
CHD1O14646 RNU2-44P-201ENST00000516795 194 ntBASIC1.7□□□□□ -2.14
CHD1O14646 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.7□□□□□ -2.14
CHD1O14646 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHD1O14646 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CHD1O14646 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CHD1O14646 Y_RNA.458-201ENST00000384240 102 ntBASIC1.69□□□□□ -2.14
CHD1O14646 MIR1250-201ENST00000408098 113 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD1O14646 COX6CP18-201ENST00000448769 222 ntBASIC1.69□□□□□ -2.14
CHD1O14646 RPS24P6-201ENST00000452670 400 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.69□□□□□ -2.14
CHD1O14646 BZW1P2-201ENST00000473537 826 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.69□□□□□ -2.14
CHD1O14646 AL096840.1-201ENST00000603287 93 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AC011472.4-201ENST00000615848 491 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD1O14646 AC010487.4-201ENST00000637027 61 ntBASIC1.69□□□□□ -2.14
CHD1O14646 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CHD1O14646 OR1L1-202ENST00000373686 1083 ntBASIC1.69□□□□□ -2.14
CHD1O14646 TXNP7-201ENST00000406296 293 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.69□□□□□ -2.14
CHD1O14646 PGBD4P6-201ENST00000421501 610 ntBASIC1.69□□□□□ -2.14
CHD1O14646 OR51AB1P-201ENST00000429046 620 ntBASIC1.69□□□□□ -2.14
CHD1O14646 UBE2V1P6-201ENST00000430840 422 ntBASIC1.69□□□□□ -2.14
CHD1O14646 ATG12P2-201ENST00000456830 416 ntBASIC1.69□□□□□ -2.14
CHD1O14646 SYPL1P1-201ENST00000473622 768 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CHD1O14646 AC020658.4-201ENST00000613987 684 ntBASIC1.69□□□□□ -2.14
CHD1O14646 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.69□□□□□ -2.14
CHD1O14646 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.68□□□□□ -2.14
CHD1O14646 MIR758-201ENST00000390227 88 ntBASIC1.68□□□□□ -2.14
CHD1O14646 Z86062.1-201ENST00000406773 777 ntBASIC1.68□□□□□ -2.14
CHD1O14646 MIR1285-1-201ENST00000408593 84 ntBASIC1.68□□□□□ -2.14
CHD1O14646 SNORD56-201ENST00000413522 71 ntBASIC1.68□□□□□ -2.14
CHD1O14646 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.68□□□□□ -2.14
CHD1O14646 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CHD1O14646 AC087272.1-201ENST00000523624 533 ntBASIC1.68□□□□□ -2.14
CHD1O14646 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.68□□□□□ -2.14
CHD1O14646 AC097655.1-201ENST00000635075 318 ntBASIC1.68□□□□□ -2.14
CHD1O14646 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.67□□□□□ -2.14
CHD1O14646 MTCYBP29-201ENST00000436327 1006 ntBASIC1.67□□□□□ -2.14
CHD1O14646 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.67□□□□□ -2.14
CHD1O14646 SETP11-201ENST00000473027 690 ntBASIC1.67□□□□□ -2.14
CHD1O14646 AC103833.1-201ENST00000517442 172 ntBASIC1.67□□□□□ -2.14
CHD1O14646 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
CHD1O14646 AC012443.1-201ENST00000605605 231 ntBASIC1.67□□□□□ -2.14
CHD1O14646 AC073592.7-201ENST00000623659 507 ntBASIC1.67□□□□□ -2.14
CHD1O14646 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CHD1O14646 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHD1O14646 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHD1O14646 Y_RNA.433-201ENST00000384089 102 ntBASIC1.66□□□□□ -2.14
CHD1O14646 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
CHD1O14646 RPL7P34-201ENST00000433316 712 ntBASIC1.66□□□□□ -2.14
CHD1O14646 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.66□□□□□ -2.14
CHD1O14646 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.66□□□□□ -2.14
CHD1O14646 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CHD1O14646 CIR1P1-201ENST00000524055 1133 ntBASIC1.66□□□□□ -2.14
CHD1O14646 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
CHD1O14646 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms