Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.69□□□□□ -1.98
CDX4O14627 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CDX4O14627 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX4O14627 AP002088.1-201ENST00000382740 395 ntBASIC2.69□□□□□ -1.98
CDX4O14627 OR5H15-201ENST00000383696 930 ntBASIC2.69□□□□□ -1.98
CDX4O14627 RPS4XP7-201ENST00000406274 780 ntBASIC2.69□□□□□ -1.98
CDX4O14627 RPL21P32-201ENST00000419877 477 ntBASIC2.69□□□□□ -1.98
CDX4O14627 MTCO2P34-201ENST00000421994 607 ntBASIC2.69□□□□□ -1.98
CDX4O14627 BX276092.3-201ENST00000424182 230 ntBASIC2.69□□□□□ -1.98
CDX4O14627 RPL27AP8-201ENST00000424277 446 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX4O14627 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX4O14627 COX6CP2-201ENST00000444980 225 ntBASIC2.69□□□□□ -1.98
CDX4O14627 RAC1P7-201ENST00000445367 377 ntBASIC2.69□□□□□ -1.98
CDX4O14627 COX6CP12-201ENST00000446748 202 ntBASIC2.69□□□□□ -1.98
CDX4O14627 WASF1P1-201ENST00000447560 1131 ntBASIC2.69□□□□□ -1.98
CDX4O14627 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX4O14627 SNRPGP9-201ENST00000456025 225 ntBASIC2.69□□□□□ -1.98
CDX4O14627 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.69□□□□□ -1.98
CDX4O14627 HMGN2P13-201ENST00000476476 274 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC116337.2-201ENST00000477662 156 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.69□□□□□ -1.98
CDX4O14627 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX4O14627 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX4O14627 AC109329.2-201ENST00000519658 482 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX4O14627 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.69□□□□□ -1.98
CDX4O14627 AGGF1P4-201ENST00000568249 801 ntBASIC2.69□□□□□ -1.98
CDX4O14627 MTCO3P24-201ENST00000572729 782 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.69□□□□□ -1.98
CDX4O14627 OR4K8P-201ENST00000578842 1048 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX4O14627 MIR3611-201ENST00000584484 83 ntBASIC2.69□□□□□ -1.98
CDX4O14627 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX4O14627 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX4O14627 AL139286.2-201ENST00000606838 396 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AL158211.4-201ENST00000606988 584 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC097468.3-201ENST00000607956 456 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AP002826.1-201ENST00000608835 315 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC099778.2-201ENST00000610904 211 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AC009268.2-201ENST00000621925 457 ntBASIC2.69□□□□□ -1.98
CDX4O14627 AL159972.1-201ENST00000625150 448 ntBASIC2.69□□□□□ -1.98
CDX4O14627 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.69□□□□□ -1.98
CDX4O14627 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CDX4O14627 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX4O14627 MTND4P5-201ENST00000435821 1374 ntBASIC2.69□□□□□ -1.98
CDX4O14627 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX4O14627 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX4O14627 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CDX4O14627 AC002546.1-201ENST00000588041 2504 ntBASIC2.69□□□□□ -1.98
CDX4O14627 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX4O14627 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDX4O14627 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDX4O14627 AL356057.3-201ENST00000402607 340 ntBASIC2.68□□□□□ -1.98
CDX4O14627 MTCYBP36-201ENST00000404146 440 ntBASIC2.68□□□□□ -1.98
CDX4O14627 MIR1290-201ENST00000408735 78 ntBASIC2.68□□□□□ -1.98
CDX4O14627 RNA5SP31-201ENST00000411144 127 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 MTND1P21-201ENST00000412991 285 ntBASIC2.68□□□□□ -1.98
CDX4O14627 MTCO3P41-201ENST00000414801 328 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AL031779.1-201ENST00000415663 330 ntBASIC2.68□□□□□ -1.98
CDX4O14627 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.68□□□□□ -1.98
CDX4O14627 RPL35AP22-201ENST00000436855 335 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 USP9YP29-201ENST00000445112 563 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDX4O14627 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX4O14627 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDX4O14627 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.68□□□□□ -1.98
CDX4O14627 AP1S2P1-201ENST00000457344 379 ntBASIC2.68□□□□□ -1.98
CDX4O14627 RNU6-956P-201ENST00000458868 103 ntBASIC2.68□□□□□ -1.98
CDX4O14627 RPS20P22-201ENST00000473700 357 ntBASIC2.68□□□□□ -1.98
CDX4O14627 HMGB1P36-201ENST00000487709 576 ntBASIC2.68□□□□□ -1.98
CDX4O14627 RPS29P21-201ENST00000496272 170 ntBASIC2.68□□□□□ -1.98
CDX4O14627 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX4O14627 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AP001804.3-201ENST00000525146 880 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC013828.2-201ENST00000532487 235 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC022880.1-201ENST00000534017 973 ntBASIC2.68□□□□□ -1.98
CDX4O14627 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.68□□□□□ -1.98
CDX4O14627 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.68□□□□□ -1.98
CDX4O14627 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 AP001429.1-201ENST00000602568 530 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC008962.1-201ENST00000605729 304 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC103710.4-201ENST00000609301 899 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC026585.1-201ENST00000619582 524 ntBASIC2.68□□□□□ -1.98
CDX4O14627 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CDX4O14627 AC084035.1-201ENST00000634543 607 ntBASIC2.68□□□□□ -1.98
CDX4O14627 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.68□□□□□ -1.98
CDX4O14627 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CDX4O14627 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CDX4O14627 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.68□□□□□ -1.98
CDX4O14627 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms