Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXN3O00409 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXN3O00409 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.9□□□□□ -1.79
FOXN3O00409 MIR4738-201ENST00000579134 87 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 AC067852.3-201ENST00000589177 561 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 AC013553.2-201ENST00000604244 589 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 AC090132.2-201ENST00000615881 347 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.9□□□□□ -1.79
FOXN3O00409 AC007998.5-201ENST00000622938 237 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 AC025034.2-201ENST00000623264 286 ntBASIC3.9□□□□□ -1.79
FOXN3O00409 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXN3O00409 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.9□□□□□ -1.79
FOXN3O00409 AC002546.1-201ENST00000588041 2504 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN3O00409 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXN3O00409 RPL7P26-201ENST00000333817 754 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 Y_RNA.70-201ENST00000362886 110 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 CIR1P3-201ENST00000405137 479 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 MIR1277-201ENST00000408536 78 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC092809.3-201ENST00000415453 231 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 MRPL50P2-201ENST00000416821 482 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 RPL17P36-201ENST00000420302 549 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC002075.2-201ENST00000425207 252 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 RPL7P2-201ENST00000427639 268 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXN3O00409 AL606489.2-201ENST00000433886 234 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXN3O00409 PIGFP3-201ENST00000441918 722 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXN3O00409 SSXP4-201ENST00000451349 245 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC084357.1-201ENST00000473404 255 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXN3O00409 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.89□□□□□ -1.79
FOXN3O00409 RNU6-507P-201ENST00000516045 100 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 RN7SKP60-201ENST00000516985 239 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.89□□□□□ -1.79
FOXN3O00409 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN3O00409 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXN3O00409 HMGB1P33-201ENST00000563485 527 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC006504.3-201ENST00000586818 523 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC093227.2-201ENST00000589357 285 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AL020997.2-201ENST00000602607 184 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC104763.2-201ENST00000604179 382 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC006077.1-201ENST00000604746 343 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC130324.3-201ENST00000614165 542 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AC099654.14-201ENST00000638599 341 ntBASIC3.89□□□□□ -1.79
FOXN3O00409 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.89□□□□□ -1.79
FOXN3O00409 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN3O00409 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN3O00409 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
FOXN3O00409 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN3O00409 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
FOXN3O00409 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN3O00409 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN3O00409 Y_RNA.9-201ENST00000362354 101 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 RNU4-48P-201ENST00000365559 182 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 RPS4XP8-201ENST00000402039 771 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 Z98941.1-201ENST00000407764 100 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 RN7SKP263-201ENST00000411194 309 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN3O00409 NDUFB4P7-201ENST00000423198 363 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN3O00409 SNRPEP8-201ENST00000442866 260 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN3O00409 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.88□□□□□ -1.79
FOXN3O00409 AC074344.1-201ENST00000512823 224 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN3O00409 RNU1-61P-201ENST00000516107 151 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 Y_RNA.689-201ENST00000516589 107 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 RNU6-677P-201ENST00000516914 101 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 HMGB1P6-201ENST00000569046 646 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 MIR3186-201ENST00000577404 85 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 AC008752.3-201ENST00000588113 712 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.88□□□□□ -1.79
FOXN3O00409 VN1R85P-201ENST00000601587 426 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 AL110115.1-201ENST00000614396 364 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 Y_RNA.804-201ENST00000615262 101 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 AL354950.2-201ENST00000617939 290 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 AC092794.2-201ENST00000620933 563 ntBASIC3.88□□□□□ -1.79
FOXN3O00409 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN3O00409 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
FOXN3O00409 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.88□□□□□ -1.79
FOXN3O00409 CEP170P1-201ENST00000502249 4587 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
FOXN3O00409 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.87□□□□□ -1.79
FOXN3O00409 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
FOXN3O00409 MIR423-201ENST00000362201 94 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RNU6-512P-201ENST00000364438 103 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RNU6-483P-201ENST00000384088 108 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 MIR454-201ENST00000390180 115 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RNU6-1197P-201ENST00000391183 107 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 AL591034.1-201ENST00000407447 340 ntBASIC3.87□□□□□ -1.79
FOXN3O00409 RNA5SP111-201ENST00000411386 101 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms