Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SRRM4A7MD48 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.69□□□□□ -1.98
SRRM4A7MD48 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.69□□□□□ -1.98
SRRM4A7MD48 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SRRM4A7MD48 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC099654.7-201ENST00000635788 2127 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC092435.3-201ENST00000565538 3654 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 Y_RNA.517-201ENST00000384551 106 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 MIR218-2-201ENST00000385006 110 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 RNA5SP252-201ENST00000391131 119 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 SAR1AP2-201ENST00000392696 594 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 RPS3AP36-201ENST00000398190 775 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 CDK8P2-201ENST00000415020 547 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 BTF3L4P3-201ENST00000418879 476 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 ELOCP14-201ENST00000428070 331 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 GOT2P5-201ENST00000433995 546 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 ARPC3P1-201ENST00000437218 533 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC073614.1-201ENST00000438690 650 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 HMGB3P12-201ENST00000438745 556 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 ELOCP7-201ENST00000439968 331 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 MTATP6P30-201ENST00000443540 664 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 snoU13.28-201ENST00000459235 104 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC034236.1-201ENST00000469891 373 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AF213884.2-201ENST00000510417 903 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 RNU6-928P-201ENST00000516876 104 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 RNU6-677P-201ENST00000516914 101 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC104027.1-201ENST00000521887 300 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AP006587.4-201ENST00000526053 529 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 NACAP3-201ENST00000552100 481 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC027807.1-201ENST00000559921 996 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC010546.1-201ENST00000569391 485 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC073648.5-201ENST00000603502 305 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 SEPT7P9-203ENST00000604116 343 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL355598.1-201ENST00000604169 202 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC091304.9-201ENST00000612091 226 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL365204.3-201ENST00000612448 685 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AC100793.4-201ENST00000613683 429 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL356321.1-201ENST00000621360 228 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL359740.1-201ENST00000624340 592 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 AL079305.1-201ENST00000623159 3008 ntBASIC2.68□□□□□ -1.98
SRRM4A7MD48 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.68□□□□□ -1.98
SRRM4A7MD48 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SRRM4A7MD48 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SRRM4A7MD48 RNU1-70P-201ENST00000362618 164 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 Y_RNA.126-201ENST00000363382 111 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 SNORA20.2-201ENST00000383922 131 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 RNU6-701P-201ENST00000384059 107 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 MIR554-201ENST00000384874 96 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC127391.1-201ENST00000411737 98 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC245291.1-201ENST00000419501 328 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC099548.1-201ENST00000421443 426 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 OR2AS1P-201ENST00000427827 319 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 HMGB1P9-201ENST00000429856 646 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 GPM6BP2-201ENST00000432046 144 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 SNRPEP9-201ENST00000436794 238 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 GPM6BP1-201ENST00000446387 144 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC006483.1-201ENST00000487308 313 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 RPL39P36-201ENST00000490784 156 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.67□□□□□ -1.98
SRRM4A7MD48 PHBP14-201ENST00000512887 367 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC010265.1-201ENST00000513509 211 ntBASIC2.67□□□□□ -1.98
SRRM4A7MD48 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms