Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 Z82190.1-201ENST00000454534 490 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC027575.1-201ENST00000481064 460 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC107032.1-201ENST00000485945 480 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 ARL2BPP4-201ENST00000506854 471 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC079148.1-201ENST00000565944 819 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC243960.4-201ENST00000600532 288 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC025588.2-201ENST00000604851 466 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC123912.5-201ENST00000605470 343 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 snoU13.31-201ENST00000607291 104 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC097372.4-201ENST00000625025 466 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 AC087821.2-201ENST00000637086 450 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 ICE2P2-201ENST00000483823 2787 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.81□□□□□ -2.28
CPSF4LA6NMK7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 RNA5SP258-201ENST00000362750 119 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 RNU1-22P-201ENST00000363334 158 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC244505.5-201ENST00000443639 207 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 MRPL35P4-201ENST00000453682 566 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC025181.1-201ENST00000477507 416 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 RPS23P4-201ENST00000487908 423 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 RPS3AP22-201ENST00000488297 769 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC105036.1-201ENST00000566222 271 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 FAM60BP-201ENST00000578364 658 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC098848.2-201ENST00000588023 330 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AL669831.4-202ENST00000590817 238 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC005498.1-201ENST00000592125 465 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 MTCO2P22-201ENST00000603246 681 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC004852.3-201ENST00000614131 326 ntBASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
CPSF4LA6NMK7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 CBX3P1-201ENST00000325243 554 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 SNORA51.12-201ENST00000384448 134 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AL589655.1-201ENST00000405398 482 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 MRPL35P3-201ENST00000421557 364 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AL009174.1-201ENST00000426577 416 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 snoU13.28-201ENST00000459235 104 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 CBX3P3-201ENST00000508108 532 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC112518.2-201ENST00000508565 425 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 RNA5SP445-201ENST00000515889 115 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 MIR5571-201ENST00000577998 113 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC021646.1-201ENST00000605469 484 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC097504.2-201ENST00000608088 454 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AL773524.1-201ENST00000614065 229 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AL589994.2-201ENST00000621124 579 ntBASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.79□□□□□ -2.28
CPSF4LA6NMK7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 SNORD114-27-201ENST00000363766 70 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 RNU6-374P-201ENST00000364146 108 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 Y_RNA.493-201ENST00000384422 102 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 MIR532-201ENST00000385025 91 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 MIR934-201ENST00000401241 83 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AL356131.1-201ENST00000405826 414 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 PIGPP2-201ENST00000411569 458 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AL136133.1-201ENST00000413694 376 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 RPL23AP36-201ENST00000413895 458 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC008850.1-201ENST00000427546 362 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC093106.2-201ENST00000428212 385 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 FGF7P5-201ENST00000441829 291 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AL034418.1-201ENST00000448675 860 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 OR6C72P-201ENST00000451403 892 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 AC008834.1-201ENST00000511612 175 ntBASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.78□□□□□ -2.28
CPSF4LA6NMK7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms