Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 MIR490-201ENST00000384865 128 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 SNORA3.3-201ENST00000408712 125 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 POLHP1-201ENST00000411806 470 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 HSPE1P1-201ENST00000421494 318 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 RPS24P13-201ENST00000442520 397 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AP000926.1-201ENST00000479573 241 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 TTC39CP1-201ENST00000512513 755 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AC104136.1-201ENST00000512969 394 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 RNU6-914P-201ENST00000516749 109 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AC022690.1-201ENST00000526681 550 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 RPS3AP23-202ENST00000574601 686 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 MIR3945-201ENST00000581853 98 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 MIR15A-201ENST00000607334 83 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 AC093913.1-201ENST00000614178 329 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 Z82217.1-201ENST00000625157 8149 ntBASIC4.62□□□□□ -1.67
CCDC85CA6NKD9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 RNU6-288P-201ENST00000363690 104 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 Y_RNA.509-201ENST00000384506 99 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 RNU6-831P-201ENST00000384548 107 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 SNORA16.2-201ENST00000390991 127 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC007390.1-201ENST00000415722 356 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AL139247.1-201ENST00000422768 325 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC092001.1-201ENST00000453012 261 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC004801.2-202ENST00000463559 283 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 KC877373.1-201ENST00000479066 408 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 RNU4-49P-201ENST00000516080 140 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 Y_RNA.691-201ENST00000516611 103 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 RNU7-30P-201ENST00000516835 62 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 OR5D17P-201ENST00000531492 978 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC090115.3-201ENST00000553218 849 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 MIR3941-201ENST00000582572 103 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC002545.1-201ENST00000592511 181 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AC006023.2-201ENST00000609916 167 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 AL132765.2-201ENST00000610812 351 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 C2orf27A-204ENST00000623058 969 ntBASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC85CA6NKD9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC008568.2-201ENST00000623862 2313 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 RNU6-600P-201ENST00000362524 99 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 RNU6-694P-201ENST00000364071 147 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 Y_RNA.414-201ENST00000384011 101 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AL121834.1-202ENST00000404494 277 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 RNU2-71P-201ENST00000411395 189 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 PRPS1P1-201ENST00000445305 876 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 RPL37P6-201ENST00000460682 294 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 RPS29P19-201ENST00000479709 171 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AL049874.2-201ENST00000492636 288 ntBASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC85CA6NKD9 RNU6-189P-201ENST00000516120 101 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms