Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MIR4635-201ENST00000583759 79 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 AC012065.4-201ENST00000602445 679 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 AC098614.4-201ENST00000607601 462 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 MIR7844-201ENST00000616161 122 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 AC090617.7-201ENST00000623952 126 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 AC139792.2-201ENST00000624218 587 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 SCARNA15.3-201ENST00000626315 122 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 SCARNA4.1-201ENST00000628597 123 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 AC068137.4-201ENST00000638485 296 ntBASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49BA6NDI0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 RNU6-809P-201ENST00000384461 107 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 U8.14-201ENST00000390843 143 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 RPL5P18-201ENST00000406671 891 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 HMGB1P11-201ENST00000413899 637 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 RPL7L1P10-201ENST00000427790 463 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 SAR1AP4-201ENST00000429225 591 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 MTND1P28-201ENST00000435623 950 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 UBE2FP3-201ENST00000436366 524 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL353706.1-201ENST00000436728 494 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL512286.1-201ENST00000439244 400 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 MTND1P30-201ENST00000441241 901 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 USP9YP29-201ENST00000445112 563 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 COX6CP12-201ENST00000446748 202 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 SNRPGP9-201ENST00000456025 225 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC082651.2-201ENST00000496833 166 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC034159.1-201ENST00000513885 583 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC034268.2-201ENST00000571784 482 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC073544.2-201ENST00000601155 540 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 BBIP1P1-201ENST00000602999 279 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 RN7SKP299-201ENST00000606679 301 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL158211.4-201ENST00000606988 584 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AL451064.1-201ENST00000607718 471 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC004067.1-201ENST00000608733 700 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC027807.2-201ENST00000616099 408 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC002550.2-201ENST00000621246 394 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 AC090582.1-201ENST00000636321 199 ntBASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49BA6NDI0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 Y_RNA.77-201ENST00000362962 107 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 RNU6-198P-201ENST00000384258 104 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 RNA5SP210-201ENST00000391034 120 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 RPL23AP39-201ENST00000415533 405 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 COTL1P1-201ENST00000422309 375 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC018630.2-202ENST00000422992 927 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC087499.2-201ENST00000432861 149 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 TAAR7P-201ENST00000436141 242 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AP000542.1-201ENST00000448473 371 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 TPT1P7-201ENST00000458300 517 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 RAC1P5-201ENST00000512182 576 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 SNORA31.26-201ENST00000517250 137 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC100870.1-201ENST00000522035 505 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 COX6CP8-201ENST00000522620 226 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC125611.2-201ENST00000551907 647 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 HMGB1P6-201ENST00000569046 646 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC008277.2-201ENST00000605196 797 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC093732.2-201ENST00000607950 274 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AL391813.2-201ENST00000609113 322 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 AC068880.5-201ENST00000624331 290 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 OR5H6-203ENST00000642105 978 ntBASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
TRIM49BA6NDI0 RNU6-462P-201ENST00000362659 105 ntBASIC2.93□□□□□ -1.94
TRIM49BA6NDI0 SNORA80A-201ENST00000363922 136 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms