Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 HMGB1P31-201ENST00000437242 427 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 MTND4P18-201ENST00000447010 465 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC073415.1-201ENST00000449240 153 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC078785.3-201ENST00000476607 425 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC233702.1-201ENST00000482905 502 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC069439.1-201ENST00000494739 167 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RPL23AP55-201ENST00000498163 452 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 HMGN1P11-201ENST00000508668 303 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-358P-201ENST00000516564 75 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SKP219-201ENST00000516825 296 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 IGKV2D-23-201ENST00000518179 286 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 OR5B19P-201ENST00000531766 928 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC005476.1-201ENST00000554427 397 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AL355836.1-201ENST00000555951 870 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 MIR3690-201ENST00000580266 75 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 BNIP3P30-201ENST00000601184 574 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AL365204.3-201ENST00000612448 685 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC025034.2-201ENST00000623264 286 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 AC099654.14-201ENST00000638599 341 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 ZNF285B-201ENST00000561698 1767 ntBASIC3.47□□□□□ -1.85
TCRBV7S3A2A0A539 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.85
TCRBV7S3A2A0A539 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-600P-201ENST00000362524 99 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 RNU6-451P-201ENST00000362921 107 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 SNORA62.1-201ENST00000364287 154 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 Y_RNA.390-201ENST00000383932 102 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 MIR514A1-201ENST00000385133 98 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 SNORD17-201ENST00000390930 237 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AL591416.1-201ENST00000404015 867 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AL354719.1-201ENST00000406535 843 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC126124.2-201ENST00000413542 321 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 NDUFB4P7-201ENST00000423198 363 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 RPL27AP8-201ENST00000424277 446 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 FTH1P6-201ENST00000430768 320 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 DPPA3P1-201ENST00000448050 469 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC006512.1-201ENST00000468816 291 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 RPL7L1P8-201ENST00000469911 741 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 RPL7P47-201ENST00000497299 556 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC074344.1-201ENST00000512823 224 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 SCARNA15.2-201ENST00000516409 127 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC107934.2-201ENST00000518653 310 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AP005435.4-201ENST00000529514 284 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC103843.2-201ENST00000530523 682 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AL020991.1-201ENST00000612314 373 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 uc_338.32-201ENST00000615087 172 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 DUXAP9-208ENST00000622815 614 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 AC103710.2-202ENST00000641454 2853 ntBASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.46□□□□□ -1.86
TCRBV7S3A2A0A539 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RPL7P26-201ENST00000333817 754 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 SNORD115-7-201ENST00000365306 82 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RNY3P14-201ENST00000384309 102 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 MIR1290-201ENST00000408735 78 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RAB28P1-201ENST00000411517 641 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 CYCSP19-201ENST00000411715 316 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AL513331.1-201ENST00000411908 397 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 CYCSP4-201ENST00000429682 331 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC008264.1-201ENST00000447612 367 ntBASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.45□□□□□ -1.86
TCRBV7S3A2A0A539 RPS4XP22-201ENST00000480755 780 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms