Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CR392039.5-201ENST00000623201 510 ntBASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 DHX9P1-201ENST00000436565 3076 ntBASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.47□□□□□ -1.53
RTCBQ9Y3I0 AL359893.1-201ENST00000447628 1580 ntBASIC5.46□□□□□ -1.53
RTCBQ9Y3I0 Y_RNA.39-201ENST00000362620 98 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 Y_RNA.152-201ENST00000363578 100 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 SNORD46.1-201ENST00000364139 104 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 Y_RNA.380-201ENST00000365663 111 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 RHOT1P2-201ENST00000366423 333 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 SNORA41-201ENST00000384675 132 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 MT-TC-201ENST00000387405 66 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC243428.1-201ENST00000421099 264 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AL445584.1-201ENST00000431451 330 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 GOT2P5-201ENST00000433995 546 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC099799.1-201ENST00000439809 192 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 PCNPP5-201ENST00000452246 481 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC010683.1-201ENST00000473673 378 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC087385.1-201ENST00000475062 312 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 DEFB109F-201ENST00000491870 277 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC026470.2-201ENST00000561492 181 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC243312.2-201ENST00000623340 601 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AL606534.2-204ENST00000635008 178 ntBASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RTCBQ9Y3I0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RNU1-63P-201ENST00000383902 164 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 Y_RNA.424-201ENST00000384063 103 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 Y_RNA.485-201ENST00000384395 102 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RNU6-55P-201ENST00000411092 107 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AL133547.1-201ENST00000448546 220 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RPL23AP81-201ENST00000455252 467 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 CEACAMP4-201ENST00000457676 421 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 HMGB1P25-201ENST00000468402 607 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RNU4-77P-201ENST00000516692 156 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RN7SKP277-201ENST00000516895 283 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AC022616.4-201ENST00000522985 181 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 HSPE1P5-201ENST00000561489 272 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 AL606490.9-201ENST00000603331 271 ntBASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RTCBQ9Y3I0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 AC106871.1-201ENST00000568324 3102 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 RNU6-874P-201ENST00000362390 105 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 Y_RNA.333-201ENST00000365274 102 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 Y_RNA.512-201ENST00000384518 102 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 AL139039.1-201ENST00000401900 692 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 RPS4XP7-201ENST00000406274 780 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 AL356968.1-201ENST00000416622 474 ntBASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.44□□□□□ -1.54
RTCBQ9Y3I0 NOTCH2P1-201ENST00000443481 624 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms