Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL590084.2-201ENST00000401481 382 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC098592.1-201ENST00000419352 333 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC091390.3-201ENST00000426478 338 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 MTND1P20-201ENST00000430341 950 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AL831737.1-201ENST00000441288 271 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AP000936.2-201ENST00000447151 681 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC133134.1-201ENST00000466800 359 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 RPL31P60-201ENST00000478450 367 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 SCARNA15.2-201ENST00000516409 127 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 RNU6-798P-201ENST00000516912 103 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC009094.1-201ENST00000564443 426 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 MTATP6P24-201ENST00000576835 677 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 MIR544B-201ENST00000582372 78 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 MIR5092-201ENST00000583139 88 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC011471.1-201ENST00000585766 187 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AP000811.1-201ENST00000603803 651 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AL031667.3-201ENST00000620124 655 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AL159972.1-201ENST00000625150 448 ntBASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
TRAPPC4Q9Y296 AC104454.1-201ENST00000421341 1401 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 RNU6-525P-201ENST00000363685 104 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AL356057.2-201ENST00000403318 432 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 RNA5SP184-201ENST00000411071 108 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 RNU6-516P-201ENST00000411381 104 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 USP9YP20-201ENST00000419224 558 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 TAAR7P-201ENST00000436141 242 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 FAM103A2P-201ENST00000444122 354 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC004924.1-201ENST00000480160 781 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 RPL30P5-201ENST00000494923 336 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 SNORA3.4-201ENST00000515969 96 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 RNA5SP356-201ENST00000515972 94 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 CASP1P1-201ENST00000526345 212 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AP004247.1-201ENST00000531556 1289 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC007336.1-201ENST00000576365 3828 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC008751.2-201ENST00000597885 980 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC013553.2-201ENST00000604244 589 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 HSPE1P7-201ENST00000604681 321 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AL035413.2-201ENST00000604801 525 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 OR2AS2P-201ENST00000606902 342 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC027309.3-201ENST00000623419 351 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 AC092608.2-201ENST00000624427 218 ntBASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.34□□□□□ -2.03
TRAPPC4Q9Y296 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
TRAPPC4Q9Y296 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 DDX10P1-201ENST00000448545 1933 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 Y_RNA.18-201ENST00000362461 102 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 RNA5SP393-201ENST00000363423 117 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AL359704.1-201ENST00000411586 781 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 RPL23AP39-201ENST00000415533 405 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 USP9YP27-201ENST00000418455 438 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC018630.2-202ENST00000422992 927 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC010099.3-201ENST00000423896 409 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AL356867.1-201ENST00000429623 299 ntBASIC2.33□□□□□ -2.04
TRAPPC4Q9Y296 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms