Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RNU5A-1-201ENST00000362698 116 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 MIR493-201ENST00000385254 89 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SATB2Q9UPW6 EEF1A1P41-201ENST00000414667 207 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 RPL32P35-201ENST00000415214 394 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC090960.1-201ENST00000421072 306 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AL049734.2-201ENST00000441066 616 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AL162389.1-201ENST00000449233 177 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 RN7SL75P-201ENST00000461926 281 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AP000797.1-201ENST00000478870 387 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 HSPE1P6-201ENST00000479457 291 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3□□□□□ -1.93
SATB2Q9UPW6 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AL359273.1-201ENST00000510918 627 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 RNU1-143P-201ENST00000516296 146 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 RN7SKP272-201ENST00000516988 232 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AL133153.1-201ENST00000557756 303 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3□□□□□ -1.93
SATB2Q9UPW6 MIR5697-201ENST00000578045 78 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC068790.3-201ENST00000602988 553 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC105129.3-201ENST00000605455 485 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AC004908.2-201ENST00000609090 574 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC107294.1-201ENST00000609524 467 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 U1.23-201ENST00000610293 146 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC093838.1-201ENST00000613014 469 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 TUG1_2.1-201ENST00000614234 87 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 RNU1-68P-201ENST00000615382 146 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 AC027807.2-201ENST00000616099 408 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 U1.39-201ENST00000621562 146 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3□□□□□ -1.93
SATB2Q9UPW6 AL035425.3-201ENST00000564206 4996 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 CUL1P1-201ENST00000509510 2425 ntBASIC3□□□□□ -1.93
SATB2Q9UPW6 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
SATB2Q9UPW6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3□□□□□ -1.93
SATB2Q9UPW6 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RNU4-21P-201ENST00000362802 126 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RNA5SP126-201ENST00000365092 109 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 SNORA23-201ENST00000365128 182 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RNU6-533P-201ENST00000384144 107 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 SNORA54-201ENST00000384281 123 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 SNORA26.8-201ENST00000391306 124 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RPL7P25-201ENST00000404151 721 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 NPM1P11-201ENST00000417106 855 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RPL27AP8-201ENST00000424277 446 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 GSTA11P-201ENST00000452866 669 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RPL23AP41-201ENST00000484754 458 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RNA5SP356-201ENST00000515972 94 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 SNORA31.1-201ENST00000515993 133 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 SNORA31.5-201ENST00000516190 133 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 RNU6-201P-201ENST00000517100 61 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 GTF3AP2-201ENST00000557014 266 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 ZNF519P3-201ENST00000557158 1032 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC083760.1-201ENST00000589621 670 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC007038.2-201ENST00000608095 740 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC012360.2-201ENST00000609349 391 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AP000254.1-201ENST00000609934 520 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC068057.2-201ENST00000624047 895 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 AC091903.1-201ENST00000624322 454 ntBASIC2.99□□□□□ -1.93
SATB2Q9UPW6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SATB2Q9UPW6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 RNU6-223P-201ENST00000362830 107 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 RNU5E-5P-201ENST00000365379 116 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AL109755.1-201ENST00000401791 649 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 RPL17P12-201ENST00000413391 526 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 UBE2FP1-201ENST00000416536 447 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AC018630.2-202ENST00000422992 927 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 CYCSP46-201ENST00000423569 204 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 Z96811.1-201ENST00000445880 108 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 COX6CP12-201ENST00000446748 202 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AL590365.1-201ENST00000450788 243 ntBASIC2.98□□□□□ -1.93
SATB2Q9UPW6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.98□□□□□ -1.93
SATB2Q9UPW6 RPL31P60-201ENST00000478450 367 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms