Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCAF8Q9UPN6 USP8P1-201ENST00000494673 3183 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 CASC19-280ENST00000642102 1351 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.89-201ENST00000363031 102 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RNU6-534P-201ENST00000364877 106 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.295-201ENST00000364918 102 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RNU6-432P-201ENST00000384196 109 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 MT-TL1-201ENST00000386347 75 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RNU6-876P-201ENST00000391295 104 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RN7SKP285-201ENST00000410137 318 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RNU4-65P-201ENST00000410473 140 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 MTCO1P20-201ENST00000425366 358 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 MTCO1P39-201ENST00000426148 480 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RPL31P35-201ENST00000431058 377 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AC002486.1-201ENST00000435098 391 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 MTCO2P29-201ENST00000465212 189 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 MLLT10P2-201ENST00000506434 249 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 KLHL2P1-201ENST00000508691 521 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 FCF1P8-201ENST00000510322 597 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 RNU6-358P-201ENST00000516564 75 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AP000857.1-201ENST00000532151 543 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 MIR3146-201ENST00000580367 79 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AL353621.2-201ENST00000605340 133 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AC007038.2-201ENST00000608095 740 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 AC006023.2-201ENST00000609916 167 ntBASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.04□□□□□ -1.76
SCAF8Q9UPN6 Z83843.1-201ENST00000604070 3685 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 MIR422A-201ENST00000362286 90 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.38-201ENST00000362617 102 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 RNU5A-8P-201ENST00000364102 114 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 MIR19A-201ENST00000384878 82 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 UBE2V1P2-201ENST00000397758 440 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AL136372.1-201ENST00000403060 228 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC137499.1-201ENST00000427602 88 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AL158071.1-201ENST00000430315 461 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 MTND1P12-201ENST00000455231 147 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 CEACAMP4-201ENST00000457676 421 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 RPL7P47-201ENST00000497299 556 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC008628.2-201ENST00000502605 298 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 VN1R104P-201ENST00000505115 1009 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC022080.3-201ENST00000544433 482 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC123904.2-201ENST00000548059 300 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 OR4T1P-201ENST00000554933 911 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AL845331.3-202ENST00000562856 261 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC008752.3-201ENST00000588113 712 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AL356055.1-201ENST00000602528 446 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC007363.1-201ENST00000604736 620 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC008945.2-201ENST00000606056 604 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC009994.1-201ENST00000606889 253 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 Y_RNA.804-201ENST00000615262 101 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC104260.1-201ENST00000616660 539 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 AC099654.5-201ENST00000636479 350 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 MIR1321-201ENST00000637766 79 ntBASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCAF8Q9UPN6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 SNORA44-201ENST00000384584 132 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 RNU2-41P-201ENST00000410991 178 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 USP9YP27-201ENST00000418455 438 ntBASIC4.02□□□□□ -1.77
SCAF8Q9UPN6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms