Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC005344.1-201ENST00000613391 459 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 U2.22-201ENST00000636441 106 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AL450326.2-201ENST00000421913 1962 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 AC000123.3-201ENST00000624029 4975 ntBASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.81□□□□□ -1.64
AP4E1Q9UPM8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AL391684.1-202ENST00000641293 1636 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC139713.2-215ENST00000641428 5037 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 MAPK10-320ENST00000641462 6696 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.48-201ENST00000362710 103 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RNU6-33P-201ENST00000384793 107 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AL030996.1-201ENST00000411430 235 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RPL21P90-201ENST00000415692 466 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 SSXP9-201ENST00000417503 292 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC008065.1-201ENST00000428525 348 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RPL12P46-201ENST00000436610 195 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC004866.2-201ENST00000438285 481 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RNU6-953P-201ENST00000459154 107 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 IGLV2-34-201ENST00000490007 283 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RNA5SP464-201ENST00000516251 108 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.673-201ENST00000516306 88 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC022080.3-201ENST00000544433 482 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC209154.1-201ENST00000582156 337 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 MIR4443-201ENST00000585052 53 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 VN1R91P-201ENST00000594377 169 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 AC012603.1-201ENST00000606424 528 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 SDR42E1P2-201ENST00000614861 481 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 SDR42E1P4-201ENST00000620894 481 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 U6.104-201ENST00000637979 90 ntBASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
AP4E1Q9UPM8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 SAGE2P-201ENST00000420011 2126 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AC090971.4-201ENST00000560291 1800 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RNU1-35P-201ENST00000362782 153 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RNY1P16-201ENST00000363063 111 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RNU6-263P-201ENST00000363811 107 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RNU6-200P-201ENST00000364743 107 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 SNORA71.2-201ENST00000364941 134 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 SNORA68.2-201ENST00000391263 128 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AL590135.1-201ENST00000422215 156 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AC016712.1-201ENST00000431088 378 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 MTND3P25-201ENST00000509243 135 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RNU6-1095P-201ENST00000516148 108 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RNU7-4P-201ENST00000516961 62 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AC107918.3-201ENST00000533272 382 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 MIR4480-201ENST00000582492 71 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AC010201.1-201ENST00000605051 540 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AL591516.1-201ENST00000611326 274 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AL031601.2-202ENST00000622650 282 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 ZNF137P-201ENST00000456718 1920 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 AC015813.6-201ENST00000624409 5808 ntBASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
AP4E1Q9UPM8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 AC005183.1-201ENST00000603687 1979 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.19-201ENST00000362462 99 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 RNU6-770P-201ENST00000363929 105 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 Y_RNA.526-201ENST00000384572 110 ntBASIC4.78□□□□□ -1.64
AP4E1Q9UPM8 MIR578-201ENST00000384828 96 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms