Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC012119.1-201ENST00000603184 222 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL031281.1-201ENST00000604049 488 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AL136363.1-201ENST00000605349 337 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AC007038.2-201ENST00000608095 740 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.54□□□□□ -2
NPIPA1Q9UND3 RN7SL853P-201ENST00000617250 223 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 AC084035.1-201ENST00000634543 607 ntBASIC2.54□□□□□ -2
NPIPA1Q9UND3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPIPA1Q9UND3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NPIPA1Q9UND3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL360182.1-201ENST00000397433 468 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 RNU6-193P-201ENST00000410977 107 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 ELOCP30-201ENST00000447108 299 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AC010631.1-201ENST00000474150 156 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 SNORA9.3-201ENST00000516383 129 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AP000857.1-201ENST00000532151 543 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AC123904.3-201ENST00000547218 814 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL391261.3-201ENST00000557194 520 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 AC010546.1-201ENST00000569391 485 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AC136618.2-201ENST00000575091 400 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 MTCO3P13-201ENST00000577757 781 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL355877.2-201ENST00000603670 358 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL627309.6-201ENST00000606857 840 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AC004908.2-201ENST00000609090 574 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL359198.2-201ENST00000611836 194 ntBASIC2.53□□□□□ -2
NPIPA1Q9UND3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.53□□□□□ -2
NPIPA1Q9UND3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.53□□□□□ -2
NPIPA1Q9UND3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC092593.1-201ENST00000515413 1815 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AL512633.1-201ENST00000399931 655 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AL356057.2-201ENST00000403318 432 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 MIR1305-201ENST00000408300 86 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 SNORD88.1-201ENST00000408684 91 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AL035407.1-201ENST00000429211 571 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 MTATP6P30-201ENST00000443540 664 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RPL39P40-201ENST00000445481 146 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RPL23AP20-201ENST00000447965 421 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RPS29P20-201ENST00000489592 171 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 LTV1P1-201ENST00000510683 1237 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC010486.1-201ENST00000511793 424 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AP004247.1-201ENST00000531556 1289 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC136601.2-201ENST00000604356 474 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC026790.2-201ENST00000606282 430 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC027449.1-201ENST00000608890 407 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC012150.2-201ENST00000621300 544 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AP002782.1-201ENST00000623107 614 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 AC022336.2-201ENST00000568966 2538 ntBASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
NPIPA1Q9UND3 MTND4P16-201ENST00000466108 1367 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 RNU6-931P-201ENST00000363850 107 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 RNU6-884P-201ENST00000363889 107 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 MIR19A-201ENST00000384878 82 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 HMGB1P11-201ENST00000413899 637 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 GTF2IP20-201ENST00000431663 360 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 USP12PX-201ENST00000432383 1057 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 AL513043.1-201ENST00000439124 535 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 RPS15AP27-201ENST00000449183 343 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 AC087588.1-201ENST00000462203 316 ntBASIC2.51□□□□□ -2.01
NPIPA1Q9UND3 MRPS17P3-201ENST00000465453 385 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms