Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 MIR218-1-201ENST00000384999 110 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AL133264.1-201ENST00000407157 562 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC004383.1-201ENST00000438135 289 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 GTF2IP12-201ENST00000456547 356 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 RPL26P9-201ENST00000457466 433 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC013828.1-201ENST00000481845 158 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 RPL21P47-201ENST00000483696 477 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC007182.2-201ENST00000489251 402 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 ANP32BP3-201ENST00000559213 706 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 ADAM3B-201ENST00000569937 840 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC007229.1-201ENST00000590455 412 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AC025165.5-201ENST00000602802 578 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 RPP40P2-201ENST00000603596 712 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 AL590396.4-201ENST00000636779 956 ntBASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
VPS29Q9UBQ0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC011477.1-204ENST00000623416 1325 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC096649.2-201ENST00000416186 393 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 BOLA3P4-201ENST00000418151 400 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 MTCO3P1-205ENST00000422088 832 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC093106.2-201ENST00000428212 385 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 MICF-203ENST00000432679 129 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL451074.3-201ENST00000437709 472 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 RNA5SP233-201ENST00000459153 113 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 RPS29P20-201ENST00000489592 171 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC096571.1-202ENST00000506634 735 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC022447.3-201ENST00000506865 495 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC112518.2-201ENST00000508565 425 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 MIR892C-201ENST00000516410 77 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 SCARNA3-201ENST00000517097 143 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL132857.1-201ENST00000555180 708 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 BNIP3P24-201ENST00000593398 557 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL450270.1-201ENST00000606160 391 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AL589743.7-201ENST00000612637 233 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC008443.7-201ENST00000622195 246 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 AC091932.3-201ENST00000624223 323 ntBASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
VPS29Q9UBQ0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 RNU1-148P-201ENST00000384472 162 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AL079342.1-201ENST00000401460 267 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AL445685.2-201ENST00000422551 342 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 PPP1R11P2-201ENST00000423543 382 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 VN1R10P-201ENST00000447106 875 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 SNORA31.6-201ENST00000516241 130 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 SNORA31.25-201ENST00000517242 134 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 RNU2-19P-201ENST00000517288 84 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC068790.3-201ENST00000602988 553 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC010678.1-201ENST00000614118 713 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC104307.1-201ENST00000616142 196 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 AC104820.1-201ENST00000624183 307 ntBASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VPS29Q9UBQ0 RNU6-140P-201ENST00000384566 108 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AL450338.1-201ENST00000407987 512 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AL445183.3-201ENST00000414168 502 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC007919.1-201ENST00000429380 217 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 MTND2P5-201ENST00000432656 1006 ntBASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.74□□□□□ -2.13
VPS29Q9UBQ0 RPS29P21-201ENST00000496272 170 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms