Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC006213.4-201ENST00000616184 634 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 U4atac.1-201ENST00000618345 95 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 AL590808.1-201ENST00000618696 141 ntBASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COMMD3Q9UBI1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 MIR634-201ENST00000385208 97 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AL049734.2-201ENST00000441066 616 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 DNAJC19P8-201ENST00000452887 259 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 MRPS17P3-201ENST00000465453 385 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC138853.1-201ENST00000503549 823 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AP004607.1-201ENST00000524456 203 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 ZNF705CP-201ENST00000530515 889 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 OR5AL2P-201ENST00000532185 920 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 LINC00933-203ENST00000559812 219 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AL354943.1-201ENST00000572103 781 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC007038.2-201ENST00000608095 740 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 MIR8081-201ENST00000611533 95 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC011330.2-201ENST00000621680 635 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC110994.2-201ENST00000635481 492 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC083865.1-201ENST00000636634 831 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC010149.2-201ENST00000637608 315 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 MKKS-204ENST00000639674 192 ntBASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
COMMD3Q9UBI1 RNA5SP276-201ENST00000362580 94 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 RNU6-253P-201ENST00000384730 105 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 RNU6-750P-201ENST00000390946 107 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 SNORA3.2-201ENST00000408221 125 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 RN7SKP192-201ENST00000411291 327 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 UBE2D3P1-201ENST00000436669 444 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC027575.1-201ENST00000481064 460 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC098799.1-201ENST00000504752 800 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 LTV1P1-201ENST00000510683 1237 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 ARL2BPP2-201ENST00000550907 489 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC009268.1-201ENST00000561352 1203 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AL022067.1-201ENST00000602426 454 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 BX248123.2-201ENST00000606318 124 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 MIR502-201ENST00000606349 86 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC010678.1-201ENST00000614118 713 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 HPVC1-201ENST00000629899 1198 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 SEC63P2-201ENST00000503863 1939 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 AC007785.2-201ENST00000598627 1916 ntBASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
COMMD3Q9UBI1 MIR449A-201ENST00000362113 91 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 CISD1P1-201ENST00000393907 327 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC016769.3-201ENST00000396562 315 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RNU2-43P-201ENST00000410306 190 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RPS15AP5-201ENST00000436276 388 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RPL26P6-201ENST00000440913 438 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RPL23AP16-201ENST00000441715 421 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AL357134.1-201ENST00000445848 426 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RPL30P9-201ENST00000465586 330 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC104564.1-201ENST00000493028 407 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC113420.1-201ENST00000507903 571 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC098591.2-201ENST00000510152 315 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC008549.1-201ENST00000512900 643 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 RNU6-889P-201ENST00000517189 103 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AP002748.2-201ENST00000528671 348 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 MTCYBP23-201ENST00000558717 1102 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC243960.4-201ENST00000600532 288 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC068276.1-201ENST00000605793 379 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC080013.4-201ENST00000607624 649 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC093673.2-201ENST00000609674 331 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AL589743.7-201ENST00000612637 233 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 AC025263.3-201ENST00000622965 1396 ntBASIC1.29□□□□□ -2.2
COMMD3Q9UBI1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms