Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MTATP6P30-201ENST00000443540 664 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC023194.1-201ENST00000493084 308 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 FCF1P8-201ENST00000510322 597 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 BNIP3P33-201ENST00000598912 569 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AP001429.1-201ENST00000602568 530 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AP000907.4-201ENST00000604143 237 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 IGHV3-29-201ENST00000604817 344 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 uc_338.12-201ENST00000616344 181 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AL136313.1-201ENST00000624804 202 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC005183.1-201ENST00000603687 1979 ntBASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SMARCAL1Q9NZC9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AL672296.1-201ENST00000427780 2158 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 RNU6-335P-201ENST00000364563 113 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 SNORA46-201ENST00000384762 135 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC068050.1-201ENST00000394891 380 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 RNU2-71P-201ENST00000411395 189 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 HMGN1P24-201ENST00000412282 298 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 RPL32P35-201ENST00000415214 394 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC063979.1-201ENST00000415539 377 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC245054.2-201ENST00000415639 319 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 MTATP6P23-201ENST00000440153 476 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AL353572.1-201ENST00000442490 417 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC012181.1-201ENST00000479895 423 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AP002812.1-201ENST00000495378 474 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 OR5AQ1P-201ENST00000527596 927 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AP000857.1-201ENST00000532151 543 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AL133153.1-201ENST00000557756 303 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 HMGB1P33-201ENST00000563485 527 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 XIAPP1-201ENST00000603162 600 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 Z84480.1-201ENST00000605131 311 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AP001596.2-201ENST00000608410 312 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC139792.3-201ENST00000623525 224 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 MTCO1P9-201ENST00000505577 1534 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC092326.2-201ENST00000624772 1561 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC244517.1-201ENST00000606030 2086 ntBASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SMARCAL1Q9NZC9 AC004520.1-201ENST00000608362 1413 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RNY1P12-201ENST00000364251 105 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 Y_RNA.453-201ENST00000384223 109 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 MIR135A2-201ENST00000384854 100 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AL078595.1-201ENST00000404458 226 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 CIR1P3-201ENST00000405137 479 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RNU6-516P-201ENST00000411381 104 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 TIMM9P3-201ENST00000428659 274 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RPS15AP9-201ENST00000439856 381 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 NFU1P2-201ENST00000448700 469 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 MTND1P9-201ENST00000453775 944 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RPS27AP1-201ENST00000475545 471 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC135721.1-201ENST00000497954 479 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC116353.2-201ENST00000505332 712 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 RNU6-1095P-201ENST00000516148 108 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 SCARNA24.1-201ENST00000516465 137 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC090572.1-201ENST00000519251 160 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC093331.1-201ENST00000521474 169 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 IGHV3-76-201ENST00000522465 295 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AC007458.1-201ENST00000542812 373 ntBASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.36□□□□□ -1.87
SMARCAL1Q9NZC9 AL512360.1-201ENST00000555346 234 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms