Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 OR4P1P-201ENST00000530808 1136 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 RPL21P12-201ENST00000559810 515 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 MIR4703-201ENST00000577728 79 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC023043.2-201ENST00000589678 1026 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC005255.1-201ENST00000593748 216 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 ATP1B3P1-201ENST00000605365 821 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC131238.1-201ENST00000617135 328 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 AC000123.2-201ENST00000623124 461 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
ATG3Q9NT62 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ATG3Q9NT62 MAPK10-320ENST00000641462 6696 ntBASIC5.3□□□□□ -1.56
ATG3Q9NT62 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG3Q9NT62 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ATG3Q9NT62 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 RNA5SP119-201ENST00000362715 117 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 RNU6-266P-201ENST00000364225 107 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 RNU6-450P-201ENST00000364654 107 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 SNORD116-11-201ENST00000383882 92 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 Y_RNA.473-201ENST00000384333 102 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 MIR1179-201ENST00000408703 91 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 PSMA6P3-201ENST00000428242 164 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 ABCF2P2-201ENST00000450549 296 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 RPS11P1-201ENST00000451072 473 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC005008.1-201ENST00000456151 612 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC012158.1-204ENST00000483430 465 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 RPL23AP41-201ENST00000484754 458 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC026726.1-201ENST00000512859 601 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 RNU6-352P-201ENST00000516908 107 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 RNU6-699P-201ENST00000517081 110 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 MTND4P7-201ENST00000523876 130 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 AL161713.1-201ENST00000555538 145 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 MIR3944-201ENST00000581277 108 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 AC011890.2-201ENST00000613393 294 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 FP236240.3-201ENST00000623061 327 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 AL159972.1-201ENST00000625150 448 ntBASIC5.29□□□□□ -1.56
ATG3Q9NT62 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.29□□□□□ -1.56
ATG3Q9NT62 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ATG3Q9NT62 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG3Q9NT62 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG3Q9NT62 AL161781.1-201ENST00000354277 403 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 Y_RNA.389-201ENST00000383924 113 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 Y_RNA.404-201ENST00000383978 102 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 MIR30B-201ENST00000384850 88 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ATG3Q9NT62 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 PRSS3P4-201ENST00000453323 162 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 HMGN3P1-201ENST00000453847 193 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 AC116562.3-201ENST00000506136 177 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 RNY3P15-201ENST00000516297 97 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 AC068587.5-201ENST00000528506 175 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 MIR5684-201ENST00000585074 65 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 AC068790.3-201ENST00000602988 553 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 AL355810.1-201ENST00000614629 552 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 LINC00901.1-201ENST00000617252 152 ntBASIC5.28□□□□□ -1.56
ATG3Q9NT62 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
ATG3Q9NT62 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.28□□□□□ -1.56
ATG3Q9NT62 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.27□□□□□ -1.57
ATG3Q9NT62 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms