Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC068313.1-201ENST00000604028 1008 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 AC104985.3-201ENST00000623479 597 ntBASIC2.2□□□□□ -2.06
TREX1Q9NSU2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.2□□□□□ -2.06
TREX1Q9NSU2 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AL079343.1-201ENST00000572358 1771 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 RNU6-97P-201ENST00000363387 104 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 RNU6-1078P-201ENST00000364522 103 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 SNORA40.2-201ENST00000390847 128 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 SNORA48.3-201ENST00000391081 134 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 BTF3P7-201ENST00000407097 488 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AL590084.1-201ENST00000407885 387 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 PGBD4P3-201ENST00000440731 581 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 BMI1P1-201ENST00000445879 941 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 IFNA11P-201ENST00000446352 526 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 HIGD1AP2-201ENST00000446367 280 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 ARPC3P5-201ENST00000448802 534 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC097493.1-201ENST00000463958 372 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 RPL30P9-201ENST00000465586 330 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC113347.3-201ENST00000509113 148 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 MTND1P36-201ENST00000522384 936 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC005832.3-201ENST00000537929 631 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 OR6C7P-201ENST00000547875 934 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AL512310.1-201ENST00000548639 172 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC004987.4-201ENST00000603383 338 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AC107294.1-201ENST00000609524 467 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AL357080.1-201ENST00000617394 239 ntBASIC2.19□□□□□ -2.06
TREX1Q9NSU2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TREX1Q9NSU2 CCT4P2-201ENST00000233836 1548 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 RNU6-637P-201ENST00000384050 107 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 RNU6-920P-201ENST00000410926 92 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AL449283.1-202ENST00000418249 604 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 SDR42E1P3-201ENST00000438345 502 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AL049734.2-201ENST00000441066 616 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 PIGFP3-201ENST00000441918 722 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AL118520.1-201ENST00000450770 291 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 RNU6-150P-201ENST00000516237 95 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 PRELID2P1-201ENST00000552837 301 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 VN1R83P-201ENST00000595685 445 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AC103710.4-201ENST00000609301 899 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AC025594.3-201ENST00000613068 790 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 AC123767.1-202ENST00000620407 817 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 OR1S1-201ENST00000624470 978 ntBASIC2.18□□□□□ -2.06
TREX1Q9NSU2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
TREX1Q9NSU2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 RNU6-343P-201ENST00000364709 104 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 RNU6-1207P-201ENST00000384343 107 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 MORF4L1P6-201ENST00000418771 268 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 TIMM9P2-201ENST00000419324 266 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC005005.2-201ENST00000420779 380 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 GTF2IP20-201ENST00000431663 360 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 IPO7P1-201ENST00000442031 636 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AL591719.1-201ENST00000444669 744 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 CBWD4P-201ENST00000445695 655 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AP1S2P1-201ENST00000457344 379 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 SNORD121B-201ENST00000458838 81 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 RPS20P20-201ENST00000460498 340 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC128713.1-201ENST00000471495 306 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC138853.1-201ENST00000503549 823 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC006499.2-201ENST00000513470 337 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 SNORA19.3-201ENST00000516165 130 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 SNRPGP18-201ENST00000553000 214 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AL512347.1-201ENST00000566420 503 ntBASIC2.17□□□□□ -2.06
TREX1Q9NSU2 AC005951.2-201ENST00000576282 495 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms