Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 U8.13-201ENST00000390842 128 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 RSL24D1P4-201ENST00000400938 484 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 RNU4-26P-201ENST00000410270 107 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 GDI2P2-201ENST00000445131 608 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 RPL30P12-201ENST00000474666 353 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 RNU6-295P-201ENST00000516901 104 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC135279.1-201ENST00000543493 504 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 YWHAZP1-201ENST00000556286 722 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 MIR3199-1-201ENST00000582434 88 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC023043.2-201ENST00000589678 1026 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.6-201ENST00000603753 252 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.11-201ENST00000604059 253 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.10-201ENST00000604330 253 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL022099.1-201ENST00000604551 712 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC008162.1-201ENST00000604718 254 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.1-201ENST00000604752 252 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.2-201ENST00000604983 252 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.5-201ENST00000605253 252 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.4-201ENST00000605279 254 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.12-201ENST00000605291 253 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.8-201ENST00000605353 252 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.9-201ENST00000605428 253 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AL670379.7-201ENST00000605823 252 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 FRG1HP-204ENST00000617940 757 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 AC092140.2-201ENST00000618027 521 ntBASIC0.77□□□□□ -2.29
SMCO4Q9NRQ5 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 SNORD114-1-201ENST00000362705 72 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 Y_RNA.67-201ENST00000362870 100 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 TATDN1P1-201ENST00000414123 891 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 Z93242.1-201ENST00000427102 353 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 TOMM20P4-201ENST00000427861 435 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 RPL32P28-201ENST00000443577 397 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 HMGB1P26-201ENST00000452520 628 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC010486.1-201ENST00000511793 424 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC112198.4-201ENST00000515450 351 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC108479.2-201ENST00000617314 601 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 AC010149.2-201ENST00000637608 315 ntBASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SMCO4Q9NRQ5 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 RNU6-1155P-201ENST00000363554 107 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 RNU6-270P-201ENST00000364131 105 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 SNORA67.5-201ENST00000391036 107 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 RPS7P9-201ENST00000414704 586 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 RPL21P90-201ENST00000415692 466 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 COX6CP18-201ENST00000448769 222 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 TRBV1-201ENST00000476502 284 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 RPL36AP21-201ENST00000490372 323 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AP001269.3-201ENST00000588718 329 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 NIFKP6-201ENST00000598115 845 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 SNORD114-21-201ENST00000606412 72 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 AL353748.2-201ENST00000622148 471 ntBASIC0.75□□□□□ -2.29
SMCO4Q9NRQ5 RNA5SP387-201ENST00000364226 106 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC092573.2-201ENST00000434546 243 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 PRPS1P1-201ENST00000445305 876 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 RPL30P5-201ENST00000494923 336 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 HMGB1P35-201ENST00000503360 598 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 FAM92A1P2-202ENST00000504766 877 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 SNORA70.16-201ENST00000516390 95 ntBASIC0.74□□□□□ -2.29
SMCO4Q9NRQ5 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms