Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RNU6-882P-201ENST00000391025 103 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RNU6-903P-201ENST00000391270 109 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AL162578.1-201ENST00000406202 378 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 TOMM22P1-201ENST00000418578 312 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 PDCL2P1-201ENST00000419302 352 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 PPP1R11P2-201ENST00000423543 382 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 MTND4LP16-201ENST00000440828 295 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 SNORD97-201ENST00000459187 142 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 HMGN2P26-201ENST00000463169 339 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RN7SL385P-201ENST00000468873 276 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RPL38P4-201ENST00000502376 214 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RNU2-27P-201ENST00000516185 142 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RN7SKP60-201ENST00000516985 239 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RNA5SP503-201ENST00000517047 117 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 HMGN1P28-201ENST00000521340 364 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AC100870.1-201ENST00000522035 505 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AC023050.3-201ENST00000541142 333 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 MIR5583-1-201ENST00000580941 59 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RNA5SP108-201ENST00000605921 117 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AL136221.1-201ENST00000621449 509 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AC025034.2-201ENST00000623264 286 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AL359697.1-201ENST00000624879 587 ntBASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.38□□□□□ -1.87
KRCC1Q9NPI7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MTND5P17-201ENST00000418405 1603 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 TAB3P1-202ENST00000452645 1634 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RNA5SP235-201ENST00000365411 114 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RNU6-61P-201ENST00000365528 109 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MIR514A2-201ENST00000385131 88 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MIR514A3-201ENST00000385132 88 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RNU6-332P-201ENST00000391193 108 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC002075.2-201ENST00000425207 252 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 CYCSP43-201ENST00000438233 310 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 CBWD4P-201ENST00000445695 655 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 UBE2V1P7-201ENST00000446395 340 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 HMGB3P30-201ENST00000457863 606 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RPL7P19-201ENST00000469948 618 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RPS27AP1-201ENST00000475545 471 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 VN1R105P-201ENST00000486595 910 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC093278.1-201ENST00000494700 600 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC105417.1-201ENST00000514691 285 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RNU4-29P-201ENST00000515943 174 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 RNU2-58P-201ENST00000516403 183 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 SNORA31.22-201ENST00000517204 135 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AL121603.1-201ENST00000553815 142 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 PARP1P2-201ENST00000556806 195 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MIR4703-201ENST00000577728 79 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MIR4697-201ENST00000582977 78 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AF038458.1-201ENST00000588406 262 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC011712.1-201ENST00000588959 234 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC005261.5-201ENST00000596280 355 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AL606490.9-201ENST00000603331 271 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC005344.1-201ENST00000613391 459 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AL589994.2-201ENST00000621124 579 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC011155.2-201ENST00000623202 216 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AC112487.2-201ENST00000637950 304 ntBASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
KRCC1Q9NPI7 AP004289.2-201ENST00000444413 1457 ntBASIC3.36□□□□□ -1.87
KRCC1Q9NPI7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRCC1Q9NPI7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms