Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNU2-70P-201ENST00000410718 179 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 AC009302.1-201ENST00000417147 390 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.98□□□□□ -2.25
CHD8Q9HCK8 TRBVB-201ENST00000477100 408 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 AC018437.1-201ENST00000492214 406 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD8Q9HCK8 IGLVI-20-201ENST00000519296 130 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD8Q9HCK8 RPL23AP88-201ENST00000605759 454 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 HSPE1P14-201ENST00000605812 302 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 XIST_intron.1-201ENST00000619444 68 ntBASIC0.98□□□□□ -2.25
CHD8Q9HCK8 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 RNU6-225P-201ENST00000384613 103 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AL512661.1-201ENST00000434586 1253 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 UBE2V2P1-201ENST00000434717 398 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 SNORD121B-201ENST00000458838 81 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 RNA5SP364-201ENST00000516938 78 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AL133393.1-201ENST00000603277 287 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AC010200.2-201ENST00000605098 235 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AC108676.2-201ENST00000605225 163 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 RNY4P24-201ENST00000362735 96 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 CCNB2P1-201ENST00000399411 1150 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AL353706.1-201ENST00000436728 494 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AL031659.1-201ENST00000447075 539 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.97□□□□□ -2.25
CHD8Q9HCK8 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
CHD8Q9HCK8 RNU6-997P-201ENST00000384725 107 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 RNA5SP193-201ENST00000410353 107 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AL022718.1-201ENST00000412004 84 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 SMARCE1P4-201ENST00000523647 241 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AC239860.2-201ENST00000525886 270 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 ACTR3BP3-201ENST00000565577 979 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 ZNF37BP-203ENST00000452306 1352 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 RNU6-203P-201ENST00000384038 104 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 RPS15AP7-201ENST00000439294 405 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AC026801.1-201ENST00000497178 464 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 RN7SKP5-201ENST00000517045 272 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 SNORD39.2-201ENST00000579995 76 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 VN1R84P-201ENST00000593697 235 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 LLPHP1-201ENST00000603571 367 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AC067838.1-201ENST00000606064 577 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AC006001.4-201ENST00000622243 395 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AL442644.1-201ENST00000454390 3105 ntBASIC0.96□□□□□ -2.26
CHD8Q9HCK8 AC068700.1-201ENST00000565862 3754 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 RNU6-629P-201ENST00000384061 103 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AL591034.1-201ENST00000407447 340 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AC109583.1-201ENST00000432156 268 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AC073055.1-201ENST00000456901 1621 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AL590233.1-201ENST00000430017 456 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 MTATP6P22-201ENST00000507369 598 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 MTCYBP37-201ENST00000510642 1133 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AC112198.4-201ENST00000515450 351 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 RNU6-56P-201ENST00000516986 93 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 ANP32BP3-201ENST00000559213 706 ntBASIC0.95□□□□□ -2.26
CHD8Q9HCK8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.95□□□□□ -2.26
CHD8Q9HCK8 AL136520.1-201ENST00000600311 1322 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 MFSD8-213ENST00000641134 1327 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 Y_RNA.25-201ENST00000362528 102 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 RNU6-799P-201ENST00000363567 107 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 RPL31P52-201ENST00000407532 367 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AC092447.6-201ENST00000414578 210 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.94□□□□□ -2.26
CHD8Q9HCK8 RPL31P58-201ENST00000469001 379 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.94□□□□□ -2.26
CHD8Q9HCK8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.94□□□□□ -2.26
CHD8Q9HCK8 MTCO1P40-201ENST00000574371 625 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 FAM106CP-201ENST00000582212 507 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AP001180.3-201ENST00000582221 145 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AC022079.2-201ENST00000619739 566 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 RNU6-185P-201ENST00000384421 107 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AL589994.1-201ENST00000404962 340 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 RNU2-40P-201ENST00000410833 196 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AC098592.2-201ENST00000413158 265 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 AL353898.1-201ENST00000444055 238 ntBASIC0.94□□□□□ -2.26
CHD8Q9HCK8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms