Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZFYVE28Q9HCC9 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZFYVE28Q9HCC9 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
ZFYVE28Q9HCC9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC138393.1-203ENST00000327086 343 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.153-201ENST00000363615 91 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-1222P-201ENST00000384615 107 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.556-201ENST00000384677 113 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 Y_RNA.645-201ENST00000391229 102 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RN7SKP58-201ENST00000411010 305 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 CYCSP19-201ENST00000411715 316 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC009237.10-201ENST00000414112 510 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RPL21P90-201ENST00000415692 466 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 NOTCH2P1-201ENST00000443481 624 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC068781.1-201ENST00000488231 618 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC009812.2-201ENST00000517657 457 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC008489.1-201ENST00000524271 483 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC006349.1-201ENST00000555526 235 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 AC140479.6-201ENST00000633535 357 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 PRO1804-201ENST00000623780 2050 ntBASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ZFYVE28Q9HCC9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-99P-201ENST00000364721 107 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-76P-201ENST00000384060 104 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNA5SP372-201ENST00000390836 115 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-882P-201ENST00000391025 103 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RN7SKP16-201ENST00000410180 299 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-101P-201ENST00000410323 104 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-55P-201ENST00000411092 107 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-847P-201ENST00000411115 108 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AL356095.1-201ENST00000417217 199 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AC099799.1-201ENST00000439809 192 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 PRDX3P3-201ENST00000447765 522 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AC090686.1-201ENST00000481577 749 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 RNU6-120P-201ENST00000516077 103 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AC091516.1-201ENST00000549191 703 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 TVP23BP1-201ENST00000557500 617 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 MIR3936-201ENST00000584304 110 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AC011373.1-201ENST00000607270 237 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 MIR6867-201ENST00000610636 67 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 AL442067.1-201ENST00000613261 223 ntBASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZFYVE28Q9HCC9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.15□□□□□ -1.58
ZFYVE28Q9HCC9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.15□□□□□ -1.58
ZFYVE28Q9HCC9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.15□□□□□ -1.58
ZFYVE28Q9HCC9 RNU2-23P-201ENST00000410545 195 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 AC073063.1-201ENST00000434352 607 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 CECR9-201ENST00000453421 199 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 AC009901.1-201ENST00000506703 541 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 RNU6-475P-201ENST00000516073 104 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 IGKV2-23-201ENST00000518729 323 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 AC107918.3-201ENST00000533272 382 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 MIR3944-201ENST00000581277 108 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 BDH2P1-201ENST00000602288 736 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 AC018889.1-201ENST00000605372 397 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 AC100812.1-201ENST00000607622 580 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 CPHL1P-201ENST00000461341 3407 ntBASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ZFYVE28Q9HCC9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms