Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC093278.1-201ENST00000494700 600 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC098799.2-201ENST00000509466 868 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 FTH1P9-201ENST00000513251 355 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 HMGN1P28-201ENST00000521340 364 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC103843.2-201ENST00000530523 682 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 HIF1AP1-201ENST00000553642 175 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 RNVU1-4-201ENST00000612985 164 ntBASIC3.77□□□□□ -1.81
USP29Q9HBJ7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
USP29Q9HBJ7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RIOK3P1-201ENST00000418778 1528 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 DDX10P1-201ENST00000448545 1933 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 MIR184-201ENST00000384962 84 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 MIR454-201ENST00000390180 115 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RNU2-43P-201ENST00000410306 190 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RNU6-1068P-201ENST00000410958 103 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 OR9R1P-201ENST00000412200 877 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RPL21P24-201ENST00000413752 448 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC004866.2-201ENST00000438285 481 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 MTND4P25-201ENST00000441039 533 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 MTCO3P45-201ENST00000443036 613 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RPS29P31-201ENST00000446147 164 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC026801.2-201ENST00000515352 425 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RNA5SP401-201ENST00000515920 127 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 RN7SKP18-201ENST00000516005 275 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 Y_RNA.702-201ENST00000516843 96 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 MIR3186-201ENST00000577404 85 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC024619.4-201ENST00000580924 316 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 NRBF2P5-201ENST00000603087 788 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 BNIP3P9-201ENST00000603714 553 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AC010591.1-201ENST00000603941 649 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 U3.45-201ENST00000607547 219 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AL354950.2-201ENST00000617939 290 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AL713922.2-201ENST00000619384 716 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 AL732372.2-225ENST00000642124 456 ntBASIC3.76□□□□□ -1.81
USP29Q9HBJ7 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
USP29Q9HBJ7 USP8P1-201ENST00000494673 3183 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AL049781.1-201ENST00000623195 3585 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RNU6-960P-201ENST00000364056 120 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 MIR607-201ENST00000385241 96 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RNU6-882P-201ENST00000391025 103 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AL359634.1-202ENST00000404721 284 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AL356776.1-201ENST00000406574 447 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RNU2-39P-201ENST00000410604 198 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AC073415.1-201ENST00000449240 153 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AL136097.1-201ENST00000456945 913 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 SNORD97-201ENST00000459187 142 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 GMFBP1-201ENST00000467831 427 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RPL23AP14-201ENST00000468281 468 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RPS27AP1-201ENST00000475545 471 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 RPL39P36-201ENST00000490784 156 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AC026427.2-201ENST00000506228 536 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 AC110768.1-201ENST00000509222 400 ntBASIC3.75□□□□□ -1.81
USP29Q9HBJ7 SNORA70.14-201ENST00000516205 110 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms