Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC010297.1-201ENST00000623948 149 ntBASIC2.9□□□□□ -1.95
RPAP3Q9H6T3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.9□□□□□ -1.95
RPAP3Q9H6T3 AC005832.2-201ENST00000538921 1430 ntBASIC2.9□□□□□ -1.95
RPAP3Q9H6T3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.9□□□□□ -1.95
RPAP3Q9H6T3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RPAP3Q9H6T3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 SNORA4.1-201ENST00000364263 144 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 RNU1-39P-201ENST00000383897 165 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 RNU6-198P-201ENST00000384258 104 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 RNU6-83P-201ENST00000384568 112 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 MIR513B-201ENST00000385136 84 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 MIR1290-201ENST00000408735 78 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC080125.1-201ENST00000414888 684 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 Z98742.3-201ENST00000418637 326 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC018630.2-202ENST00000422992 927 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 TTC39CP1-201ENST00000512513 755 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 RNU6-415P-201ENST00000516252 97 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 RNU1-104P-201ENST00000517280 175 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 CKS1BP7-201ENST00000522230 235 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC093536.2-201ENST00000565257 1406 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 AC007938.3-201ENST00000604965 623 ntBASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RPAP3Q9H6T3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 MIR592-201ENST00000384959 97 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 ANAPC10P1-201ENST00000395991 556 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AL359511.1-201ENST00000402970 211 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 MIR320C1-201ENST00000408566 88 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 TXNL1P1-201ENST00000429528 554 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC129850.1-201ENST00000436203 508 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 ARPC3P1-201ENST00000437218 533 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC010095.1-201ENST00000443543 144 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 PAXBP1P1-201ENST00000449315 447 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 RPL23AP45-201ENST00000476406 468 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 MTCO2P15-201ENST00000532655 656 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AGGF1P5-201ENST00000567900 919 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 RPL23AP84-201ENST00000571193 464 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC005951.2-201ENST00000576282 495 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC090132.2-201ENST00000615881 347 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AL356596.1-201ENST00000624230 379 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC006927.4-201ENST00000639187 543 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 ZNF876P-202ENST00000398732 1485 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 AC092447.10-201ENST00000620607 1652 ntBASIC2.88□□□□□ -1.95
RPAP3Q9H6T3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 RNU6-853P-201ENST00000364306 107 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 RNU1-100P-201ENST00000365255 165 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 CR769776.1-201ENST00000441254 787 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 MTND2P24-201ENST00000453434 806 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AC234781.5-201ENST00000508429 271 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 RNU6-311P-201ENST00000516224 102 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 RNU6-928P-201ENST00000516876 104 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 MTND2P32-201ENST00000521584 1038 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 VN1R82P-201ENST00000601481 356 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AL357094.1-201ENST00000603845 844 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AC013553.2-201ENST00000604244 589 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 AC006020.1-201ENST00000420179 1854 ntBASIC2.87□□□□□ -1.95
RPAP3Q9H6T3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms