Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 BX664608.1-201ENST00000610519 487 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC093838.1-201ENST00000613014 469 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC006111.3-201ENST00000622137 383 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 AL161431.1-201ENST00000618966 4205 ntBASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CCDC28BQ9BUN5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC091564.4-201ENST00000533934 2194 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC093010.3-201ENST00000570269 15214 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-173P-201ENST00000364215 104 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 Y_RNA.559-201ENST00000384686 107 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 MIR19A-201ENST00000384878 82 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AL136372.1-201ENST00000403060 228 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AL353678.1-201ENST00000422735 741 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 OR4K11P-201ENST00000431829 904 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 CR769767.1-201ENST00000436337 346 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC004866.2-201ENST00000438285 481 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 TPT1P14-201ENST00000448018 505 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 RNU7-59P-201ENST00000459101 61 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC103975.1-201ENST00000482506 483 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 MLLT10P2-201ENST00000506434 249 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 SNORA9.3-201ENST00000516383 129 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC004223.2-201ENST00000590309 544 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AL022099.1-201ENST00000604551 712 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC069200.1-201ENST00000609511 323 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC104073.3-201ENST00000610942 955 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC084782.3-201ENST00000612282 578 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC008250.2-201ENST00000615261 205 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AL603758.1-201ENST00000618654 241 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AL159972.1-201ENST00000625150 448 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC092104.1-201ENST00000497346 1441 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 AC233263.6-201ENST00000631132 1963 ntBASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CCDC28BQ9BUN5 FARSBP1-201ENST00000435808 1778 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RNU5A-8P-201ENST00000364102 114 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-432P-201ENST00000384196 109 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-348P-201ENST00000384386 107 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-297P-201ENST00000384636 107 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 DEFB108C-201ENST00000400154 252 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RN7SKP220-201ENST00000410611 288 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RNU2-8P-201ENST00000410727 190 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 SPA17P1-201ENST00000416656 452 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC097713.2-201ENST00000430199 356 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC090774.1-201ENST00000435925 246 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 CYCSP35-201ENST00000451978 304 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC108059.3-201ENST00000456388 214 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 snoU13.4-201ENST00000458916 104 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RN7SL293P-201ENST00000481765 281 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 Y_RNA.672-201ENST00000516289 104 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-798P-201ENST00000516912 103 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AP003122.4-201ENST00000530980 758 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC123904.2-201ENST00000548059 300 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 FAM60BP-201ENST00000578364 658 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 MIR3146-201ENST00000580367 79 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 MIR3605-201ENST00000583214 100 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 NRBF2P1-201ENST00000587407 859 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 KC877982.1-201ENST00000602313 470 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC079089.3-201ENST00000603094 673 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC015871.2-201ENST00000603605 948 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC012443.1-201ENST00000605605 231 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC008962.1-201ENST00000605729 304 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC012557.2-201ENST00000605919 418 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC007038.2-201ENST00000608095 740 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms