Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AL596028.1-201ENST00000326971 197 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AL161781.1-201ENST00000354277 403 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 SNORD114-30-201ENST00000364448 72 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RNU6-301P-201ENST00000384277 107 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RNU6-750P-201ENST00000390946 107 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AL162578.1-201ENST00000406202 378 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RNU2-49P-201ENST00000410666 184 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RN7SKP192-201ENST00000411291 327 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 VN1R51P-201ENST00000411675 945 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AL513331.1-201ENST00000411908 397 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 HMGB3P2-201ENST00000411913 584 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC023141.4-201ENST00000412031 328 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 MTND4P3-201ENST00000417829 541 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 OSTCP8-201ENST00000445117 448 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RPL18AP17-201ENST00000455326 198 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AL139109.1-201ENST00000455491 297 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RPL12P25-201ENST00000455592 494 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 BX322784.1-201ENST00000455793 1077 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RNU7-136P-201ENST00000458819 69 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC069528.1-202ENST00000482888 637 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RPS29P20-201ENST00000489592 171 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RNU5F-8P-201ENST00000515941 111 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RNU6-1028P-201ENST00000517164 93 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 BTF3P12-201ENST00000519620 469 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AP003168.1-201ENST00000530091 307 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC087241.2-201ENST00000535801 324 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC027176.1-201ENST00000560204 514 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC135628.1-201ENST00000568867 534 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 RPS15AP11-201ENST00000594193 385 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC007938.3-201ENST00000604965 623 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC024257.5-201ENST00000612739 531 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC009268.2-201ENST00000621925 457 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC019226.1-201ENST00000625666 515 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 MTND4P27-201ENST00000450813 1354 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC009902.3-201ENST00000606235 2172 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 AC010329.5-201ENST00000623497 2174 ntBASIC1.66□□□□□ -2.14
UPK3BQ9BT76 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.65□□□□□ -2.14
UPK3BQ9BT76 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RNA5SP126-201ENST00000365092 109 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RNU1-39P-201ENST00000383897 165 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RNU6-1207P-201ENST00000384343 107 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RNU6-754P-201ENST00000391166 107 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RPL23AP29-201ENST00000397284 453 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RSL24D1P4-201ENST00000400938 484 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 TXNP7-201ENST00000406296 293 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RNU4-53P-201ENST00000410828 140 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RNU6-516P-201ENST00000411381 104 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 USP9YP19-201ENST00000412165 485 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC009963.1-201ENST00000417265 157 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 USP9YP13-201ENST00000417797 480 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 BX119904.4-201ENST00000424402 301 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AL356320.1-201ENST00000429616 163 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RPL32P28-201ENST00000443577 397 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 IFNA11P-201ENST00000446352 526 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC097493.1-201ENST00000463958 372 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 RN7SL636P-201ENST00000497504 294 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC008427.1-201ENST00000503102 655 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC006499.2-201ENST00000513470 337 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 CKS1BP7-201ENST00000522230 235 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 OR6C7P-201ENST00000547875 934 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC009127.3-201ENST00000570531 403 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AP000403.1-201ENST00000603349 851 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC021749.1-201ENST00000604322 607 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC005332.10-201ENST00000612725 619 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC023158.2-201ENST00000614876 543 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC245884.12-201ENST00000615364 59 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC010133.1-201ENST00000615809 842 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC009159.1-201ENST00000618386 642 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 AC080128.1-201ENST00000474389 1917 ntBASIC1.65□□□□□ -2.15
UPK3BQ9BT76 ZNF720P1-201ENST00000562403 1939 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms