Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 TPMTP2-201ENST00000414372 726 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.08□□□□□ -2.08
VAT1Q99536 Z98742.3-201ENST00000418637 326 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC007919.1-201ENST00000429380 217 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 MYL8P-204ENST00000431574 518 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 PTGES3P1-201ENST00000439531 483 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1Q99536 RPL23AP7-203ENST00000449021 469 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.08□□□□□ -2.08
VAT1Q99536 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.08□□□□□ -2.08
VAT1Q99536 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.08□□□□□ -2.08
VAT1Q99536 AC008628.1-201ENST00000508663 265 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 MTCYBP16-201ENST00000509187 1129 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.08□□□□□ -2.08
VAT1Q99536 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.08□□□□□ -2.08
VAT1Q99536 ISCA1P3-201ENST00000577104 373 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC002984.1-201ENST00000591692 448 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC099785.1-201ENST00000605697 437 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC008498.1-201ENST00000613012 531 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 AC013476.2-201ENST00000614456 459 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 MTND1P37-201ENST00000636562 264 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
VAT1Q99536 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAT1Q99536 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
VAT1Q99536 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VAT1Q99536 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VAT1Q99536 RNU6-343P-201ENST00000364709 104 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 RNU6-140P-201ENST00000384566 108 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 RN7SKP223-201ENST00000410582 62 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 RN7SKP192-201ENST00000411291 327 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 RNA5SP508-201ENST00000411327 119 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 ZNF863P-201ENST00000426746 417 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 ARF4P4-201ENST00000439608 520 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AL353705.4-201ENST00000449661 238 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.07□□□□□ -2.08
VAT1Q99536 RPS29P20-201ENST00000489592 171 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.07□□□□□ -2.08
VAT1Q99536 RPL9P6-201ENST00000492764 598 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VAT1Q99536 AC008427.1-201ENST00000503102 655 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.07□□□□□ -2.08
VAT1Q99536 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.07□□□□□ -2.08
VAT1Q99536 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 RNU6-714P-201ENST00000516963 103 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 NRON-201ENST00000517270 370 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 SCARNA11.3-201ENST00000517276 130 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.07□□□□□ -2.08
VAT1Q99536 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.07□□□□□ -2.08
VAT1Q99536 SLC2A13P1-201ENST00000531560 322 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.07□□□□□ -2.08
VAT1Q99536 AC023824.2-201ENST00000566185 400 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 MIR3616-201ENST00000584070 92 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.07□□□□□ -2.08
VAT1Q99536 OR10AB1P-201ENST00000609613 938 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 FTX_3.1-201ENST00000610451 147 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AC073592.7-201ENST00000623659 507 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AL356094.1-201ENST00000624663 1212 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
VAT1Q99536 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VAT1Q99536 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VAT1Q99536 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 RNU1-39P-201ENST00000383897 165 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 SNORA6-201ENST00000384033 151 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VAT1Q99536 SNORA3.2-201ENST00000408221 125 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 BX119904.4-201ENST00000424402 301 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.06□□□□□ -2.08
VAT1Q99536 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
VAT1Q99536 USP9YP22-201ENST00000438971 294 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 OR10R1P-201ENST00000441524 1141 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
VAT1Q99536 RPL12P25-201ENST00000455592 494 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 ATG12P2-201ENST00000456830 416 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.06□□□□□ -2.08
VAT1Q99536 snoU13.8-201ENST00000458890 104 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 RPL30P9-201ENST00000465586 330 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.06□□□□□ -2.08
VAT1Q99536 AC008549.1-201ENST00000512900 643 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VAT1Q99536 RNU6-583P-201ENST00000516012 92 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 RNU6-1225P-201ENST00000516336 65 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VAT1Q99536 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VAT1Q99536 DEFB130C-202ENST00000530001 230 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.06□□□□□ -2.08
VAT1Q99536 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
VAT1Q99536 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
VAT1Q99536 AC136601.2-201ENST00000604356 474 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 AC135507.1-201ENST00000607214 561 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 MIR4275-201ENST00000636486 87 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.06□□□□□ -2.08
VAT1Q99536 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms