Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.65□□□□□ -1.66
CITED4Q96RK1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CITED4Q96RK1 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.65□□□□□ -1.66
CITED4Q96RK1 SALL4P2-201ENST00000423288 2910 ntBASIC4.65□□□□□ -1.66
CITED4Q96RK1 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CITED4Q96RK1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.65□□□□□ -1.66
CITED4Q96RK1 Y_RNA.26-201ENST00000362539 101 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 RNU6-105P-201ENST00000363909 104 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 SNORA12.2-201ENST00000391040 156 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 MTCYBP2-201ENST00000407745 171 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 HMGB3P8-201ENST00000449709 577 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 SDC4P-201ENST00000453285 601 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 AC100832.1-201ENST00000471945 383 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 RN7SL326P-201ENST00000477493 296 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AC105384.2-201ENST00000508433 640 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 MIR2117-201ENST00000516780 80 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 RN7SKP35-201ENST00000517210 151 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AC027544.3-201ENST00000535082 757 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.65□□□□□ -1.67
CITED4Q96RK1 MIR4701-201ENST00000583094 63 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 AL021997.2-201ENST00000615674 271 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 AC130454.1-201ENST00000622948 401 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CITED4Q96RK1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CITED4Q96RK1 AP004607.3-201ENST00000530354 3915 ntBASIC4.65□□□□□ -1.67
CITED4Q96RK1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 AP001148.1-201ENST00000624124 2359 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 U3.13-201ENST00000364804 214 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 RNU1-73P-201ENST00000383971 164 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 Y_RNA.447-201ENST00000384184 113 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 SNORA51.9-201ENST00000384295 124 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 MT-TR-201ENST00000387439 65 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 RNA5SP44-201ENST00000410446 133 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 RPL19P16-201ENST00000433839 588 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 MTATP6P7-201ENST00000453315 681 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC007998.1-201ENST00000474156 672 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 RPL32P33-201ENST00000487023 394 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 RNU6-408P-201ENST00000515910 100 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 RNA5SP271-201ENST00000516700 88 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 RNU6-570P-201ENST00000517051 105 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC027308.1-201ENST00000517993 110 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC134698.5-201ENST00000519444 336 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC069307.1-201ENST00000602820 447 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC127024.6-201ENST00000621598 424 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.64□□□□□ -1.67
CITED4Q96RK1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 AC233981.2-201ENST00000611524 1614 ntBASIC4.64□□□□□ -1.67
CITED4Q96RK1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CITED4Q96RK1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CITED4Q96RK1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 AC139713.2-215ENST00000641428 5037 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 AC010615.1-201ENST00000594254 1764 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CITED4Q96RK1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 RNU6-858P-201ENST00000362436 107 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 RN7SKP95-201ENST00000362860 303 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 Y_RNA.276-201ENST00000364732 109 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 Y_RNA.376-201ENST00000365638 108 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 Z98749.2-208ENST00000381646 500 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 Y_RNA.483-201ENST00000384380 101 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 YPEL5P1-201ENST00000419731 367 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 AC079355.1-201ENST00000421770 223 ntBASIC4.63□□□□□ -1.67
CITED4Q96RK1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC4.63□□□□□ -1.67
CITED4Q96RK1 ATP5LP2-201ENST00000440646 311 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms