Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NR1H4Q96RI1 AC093831.2-201ENST00000624393 3427 ntBASIC3.32□□□□□ -1.88
NR1H4Q96RI1 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 Y_RNA.22-201ENST00000362492 102 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 U3.6-201ENST00000363622 211 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNA5SP130-201ENST00000364431 114 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNA5SP97-201ENST00000365006 84 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNU6-282P-201ENST00000365357 103 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNU6-14P-201ENST00000384630 106 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 SNORD116-4-201ENST00000384733 96 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNU1-101P-201ENST00000391171 127 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL031121.1-201ENST00000406553 254 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RPS12P24-201ENST00000412619 387 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RPL18P10-201ENST00000425606 538 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL451062.2-201ENST00000427515 271 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 ELOCP14-201ENST00000428070 331 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 MTCO2P11-201ENST00000431069 680 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 GOT2P5-201ENST00000433995 546 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 ELOCP7-201ENST00000439968 331 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC132479.1-201ENST00000449160 144 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RPL21P8-201ENST00000465083 535 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC082651.2-201ENST00000496833 166 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC108078.2-201ENST00000510750 236 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 APOOP4-201ENST00000513530 597 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNU6-928P-201ENST00000516876 104 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 RNA5SP471-201ENST00000516971 106 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC245505.1-201ENST00000556398 224 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 MIR4284-201ENST00000578924 81 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL359547.2-201ENST00000615810 418 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 MLECP1-201ENST00000615893 709 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NR1H4Q96RI1 AL359693.1-201ENST00000614959 2407 ntBASIC3.31□□□□□ -1.88
NR1H4Q96RI1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 RNU6-387P-201ENST00000411331 105 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC093151.1-201ENST00000427711 313 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 DDX3P2-201ENST00000446138 111 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 snoU13.28-201ENST00000459235 104 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 RPS15AP34-201ENST00000487776 387 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 HMGB1P29-201ENST00000505659 499 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 RNU1-143P-201ENST00000516296 146 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 MRPL49P2-201ENST00000521066 465 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 ADI1P3-201ENST00000549509 470 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC010546.1-201ENST00000569391 485 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC006504.3-201ENST00000586818 523 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC006077.1-201ENST00000604746 343 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AL158032.1-201ENST00000605401 106 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AL121992.2-201ENST00000606262 256 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 U1.23-201ENST00000610293 146 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 RNU1-68P-201ENST00000615382 146 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 U1.39-201ENST00000621562 146 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 U6.114-201ENST00000636407 96 ntBASIC3.3□□□□□ -1.88
NR1H4Q96RI1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NR1H4Q96RI1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
NR1H4Q96RI1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms