Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC004925.1-201ENST00000624256 2706 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 MTND4P14-201ENST00000435799 1354 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX18Q96RF0 SNORA60-201ENST00000362396 134 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 RNU6-1287P-201ENST00000362914 107 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 Y_RNA.184-201ENST00000363884 108 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX18Q96RF0 XGY1-201ENST00000381172 446 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 RNU6-701P-201ENST00000384059 107 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 RNU6-1060P-201ENST00000384664 107 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 RNU6-328P-201ENST00000390887 106 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC083863.1-201ENST00000438811 231 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 RPL23AP55-201ENST00000498163 452 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 VN1R104P-201ENST00000505115 1009 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 MLLT10P2-201ENST00000506434 249 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 KLHL2P1-201ENST00000508691 521 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 IGKV2-23-201ENST00000518729 323 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AP003730.1-201ENST00000524605 285 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC109635.4-202ENST00000531666 412 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL118558.2-201ENST00000556294 238 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC026464.5-201ENST00000562497 722 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC022968.1-201ENST00000567372 442 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL355375.2-201ENST00000574825 175 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC022655.2-201ENST00000577280 318 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 MIR3186-201ENST00000577404 85 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 MIR1254-2-201ENST00000579553 63 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 MIR4424-201ENST00000585257 86 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC006116.10-201ENST00000591836 581 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC007687.1-201ENST00000602704 304 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AC103710.3-201ENST00000608157 948 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL442067.2-201ENST00000614033 363 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 uc_338.34-201ENST00000617467 174 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 C2orf27A-204ENST00000623058 969 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL773545.4-201ENST00000637262 310 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 MIR1302-1-201ENST00000637932 143 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 AL513478.4-201ENST00000641636 310 ntBASIC3.67□□□□□ -1.82
SNX18Q96RF0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX18Q96RF0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX18Q96RF0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX18Q96RF0 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SNX18Q96RF0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SNX18Q96RF0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 RNU6-522P-201ENST00000364497 107 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 SMIM11P1-201ENST00000369586 178 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 RNU6-946P-201ENST00000383878 107 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 RNU6-116P-201ENST00000384042 109 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 RNU6-831P-201ENST00000384548 107 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AL022722.2-201ENST00000402519 180 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 NDUFS5P1-201ENST00000405668 289 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 FAT1P1-201ENST00000406588 507 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC024082.2-201ENST00000434771 238 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 PPP1R2P5-201ENST00000457256 603 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 RNU6-329P-201ENST00000459618 107 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX18Q96RF0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 RPL29P14-201ENST00000495837 428 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC091885.1-201ENST00000506658 268 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 RBBP4P6-201ENST00000508098 202 ntBASIC3.66□□□□□ -1.82
SNX18Q96RF0 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX18Q96RF0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms