Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.56□□□□□ -2
RPRD1AQ96P16 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.56□□□□□ -2
RPRD1AQ96P16 GLYCAM1-201ENST00000546596 285 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.56□□□□□ -2
RPRD1AQ96P16 AC087465.1-201ENST00000560574 245 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.56□□□□□ -2
RPRD1AQ96P16 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.56□□□□□ -2
RPRD1AQ96P16 TPMTP1-201ENST00000592307 737 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.56□□□□□ -2
RPRD1AQ96P16 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.56□□□□□ -2
RPRD1AQ96P16 IGHVIII-44-202ENST00000636235 289 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 MTND4P9-201ENST00000507819 1346 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC099786.3-201ENST00000565735 1410 ntBASIC2.56□□□□□ -2
RPRD1AQ96P16 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
RPRD1AQ96P16 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPRD1AQ96P16 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.56□□□□□ -2
RPRD1AQ96P16 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
RPRD1AQ96P16 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
RPRD1AQ96P16 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPRD1AQ96P16 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RPRD1AQ96P16 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.55□□□□□ -2
RPRD1AQ96P16 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.55□□□□□ -2
RPRD1AQ96P16 AC098614.2-201ENST00000426040 255 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 ZNF863P-201ENST00000426746 417 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.55□□□□□ -2
RPRD1AQ96P16 FCF1P1-201ENST00000432690 571 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 AL031313.1-201ENST00000448435 256 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.55□□□□□ -2
RPRD1AQ96P16 FCF1P6-201ENST00000456841 595 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.55□□□□□ -2
RPRD1AQ96P16 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
RPRD1AQ96P16 AC023538.1-201ENST00000534576 736 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.55□□□□□ -2
RPRD1AQ96P16 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.55□□□□□ -2
RPRD1AQ96P16 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.55□□□□□ -2
RPRD1AQ96P16 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.55□□□□□ -2
RPRD1AQ96P16 MIR3616-201ENST00000584070 92 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
RPRD1AQ96P16 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.55□□□□□ -2
RPRD1AQ96P16 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.55□□□□□ -2
RPRD1AQ96P16 AC136601.2-201ENST00000604356 474 ntBASIC2.55□□□□□ -2
RPRD1AQ96P16 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPRD1AQ96P16 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.54□□□□□ -2
RPRD1AQ96P16 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RPRD1AQ96P16 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.54□□□□□ -2
RPRD1AQ96P16 RNU6-432P-201ENST00000384196 109 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 RNU6-140P-201ENST00000384566 108 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AL513331.1-201ENST00000411908 397 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 MTCO2P17-201ENST00000424336 677 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
RPRD1AQ96P16 TPT1P14-201ENST00000448018 505 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 MTCO1P27-201ENST00000448269 226 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 RPS15AP27-201ENST00000449183 343 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC233279.1-201ENST00000455300 423 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 RBM43P1-201ENST00000476891 1081 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AC134050.1-201ENST00000495088 933 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AC114786.4-201ENST00000508771 728 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC010587.2-201ENST00000511727 448 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AC114797.1-201ENST00000514003 728 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 RNA5SP471-201ENST00000516971 106 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 RNA5SP291-201ENST00000517222 105 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC109329.2-201ENST00000519658 482 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
RPRD1AQ96P16 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
RPRD1AQ96P16 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.54□□□□□ -2
RPRD1AQ96P16 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.54□□□□□ -2
RPRD1AQ96P16 MYL12BP1-201ENST00000569826 507 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.54□□□□□ -2
RPRD1AQ96P16 AC005498.1-201ENST00000592125 465 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC002545.1-201ENST00000592511 181 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AL157392.4-201ENST00000609756 345 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 FTX_3.1-201ENST00000610451 147 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AL133445.2-201ENST00000611191 527 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 SDR42E1P2-201ENST00000614861 481 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC079395.3-201ENST00000615161 484 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.54□□□□□ -2
RPRD1AQ96P16 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.54□□□□□ -2
RPRD1AQ96P16 ZNF658B-202ENST00000615961 3375 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 AC009902.3-201ENST00000606235 2172 ntBASIC2.54□□□□□ -2
RPRD1AQ96P16 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RPRD1AQ96P16 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
RPRD1AQ96P16 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
RPRD1AQ96P16 RNU6-853P-201ENST00000364306 107 ntBASIC2.53□□□□□ -2
RPRD1AQ96P16 RNU4-68P-201ENST00000364314 141 ntBASIC2.53□□□□□ -2
RPRD1AQ96P16 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RPRD1AQ96P16 RNU6-1242P-201ENST00000391052 103 ntBASIC2.53□□□□□ -2
RPRD1AQ96P16 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms