Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MIR4474-201ENST00000579189 78 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC068620.4-201ENST00000636730 1182 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 AC104472.2-201ENST00000469035 601 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.87□□□□□ -2.27
CFAP54Q96N23 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.87□□□□□ -2.27
CFAP54Q96N23 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CFAP54Q96N23 SSXP9-201ENST00000417503 292 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 ZNF90P2-204ENST00000419323 1075 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 AL627224.1-201ENST00000448334 444 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 AC010889.1-201ENST00000566193 2666 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
CFAP54Q96N23 RNA5SP492-201ENST00000411330 114 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 UBE2V1P9-201ENST00000414760 368 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 OR6C66P-201ENST00000414917 930 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 BX682237.1-201ENST00000415016 335 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 MIR4802-201ENST00000581881 80 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 AC067863.3-201ENST00000624172 122 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.86□□□□□ -2.27
CFAP54Q96N23 AC138915.1-201ENST00000565427 1685 ntBASIC0.86□□□□□ -2.27
CFAP54Q96N23 Y_RNA.571-201ENST00000384753 98 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 FTH1P15-201ENST00000406984 280 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC020658.4-201ENST00000613987 684 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC091304.6-201ENST00000619761 202 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 SNORA2A-201ENST00000383885 135 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 RNU1-101P-201ENST00000391171 127 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 MTCO3P46-201ENST00000425787 232 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC012497.1-201ENST00000429392 575 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 HSFY3P-201ENST00000444242 1191 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 snoU13.19-201ENST00000459148 104 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 AL139397.2-201ENST00000404529 772 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 RNA5SP498-201ENST00000411342 120 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC008676.3-201ENST00000521237 435 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.85□□□□□ -2.27
CFAP54Q96N23 AC000123.2-201ENST00000623124 461 ntBASIC0.85□□□□□ -2.27
CFAP54Q96N23 RPL21P90-201ENST00000415692 466 ntBASIC0.84□□□□□ -2.27
CFAP54Q96N23 HSPE1P1-201ENST00000421494 318 ntBASIC0.84□□□□□ -2.27
CFAP54Q96N23 Z96811.1-201ENST00000445880 108 ntBASIC0.84□□□□□ -2.27
CFAP54Q96N23 SCARNA1-201ENST00000517138 166 ntBASIC0.84□□□□□ -2.27
CFAP54Q96N23 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC0.84□□□□□ -2.27
CFAP54Q96N23 AC005786.1-201ENST00000588553 154 ntBASIC0.84□□□□□ -2.27
CFAP54Q96N23 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.84□□□□□ -2.27
CFAP54Q96N23 AL591704.2-201ENST00000421658 181 ntBASIC0.84□□□□□ -2.28
CFAP54Q96N23 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.84□□□□□ -2.28
CFAP54Q96N23 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CFAP54Q96N23 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.28
CFAP54Q96N23 AC138907.6-201ENST00000568401 126 ntBASIC0.84□□□□□ -2.28
CFAP54Q96N23 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 DUXAP4-201ENST00000603046 613 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 RNU6-84P-201ENST00000607737 102 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CFAP54Q96N23 AL390862.1-201ENST00000635467 1469 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 RNA5SP276-201ENST00000362580 94 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 Y_RNA.142-201ENST00000363491 102 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 SNORD14B-201ENST00000364533 90 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 SNORA67.1-201ENST00000364749 141 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 Z95118.1-201ENST00000421372 247 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 SNORD116-26-201ENST00000516006 96 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 AC083923.1-201ENST00000523708 376 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 MIR3122-201ENST00000577243 73 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 UBE2L4-201ENST00000587688 464 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 RPS15AP11-201ENST00000594193 385 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 ELL2P3-201ENST00000457883 1602 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 AP000567.1-201ENST00000406413 156 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.83□□□□□ -2.28
CFAP54Q96N23 AL136380.1-201ENST00000447970 162 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 AC018437.1-201ENST00000492214 406 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CFAP54Q96N23 BNIP3P26-201ENST00000600827 554 ntBASIC0.83□□□□□ -2.28
CFAP54Q96N23 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
CFAP54Q96N23 RNU6-146P-201ENST00000384602 108 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms