Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AL607023.1-201ENST00000620045 248 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC112204.3-201ENST00000623822 332 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC091965.5-201ENST00000624785 342 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC097655.1-201ENST00000635075 318 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AP003399.1-201ENST00000637534 361 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 AC092125.1-201ENST00000562568 1995 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.9□□□□□ -1.95
ZNF560Q96MR9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.9□□□□□ -1.95
ZNF560Q96MR9 CCT4P2-201ENST00000233836 1548 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AL391994.1-201ENST00000254724 282 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 RPL21P24-201ENST00000413752 448 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 ZNF863P-201ENST00000426746 417 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 ARL5AP4-201ENST00000430731 512 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC112220.1-201ENST00000434628 355 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 RPS29P6-201ENST00000438196 145 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC090525.1-201ENST00000479116 478 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 MTND2P14-201ENST00000482139 351 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC055855.1-201ENST00000489563 579 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 LTV1P1-201ENST00000510683 1237 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC100870.1-201ENST00000522035 505 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC013828.2-201ENST00000532487 235 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC008739.2-201ENST00000597006 317 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC006023.1-201ENST00000603944 259 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC112187.2-201ENST00000604345 283 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC136601.2-201ENST00000604356 474 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC105148.1-201ENST00000604961 409 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC239868.4-201ENST00000608318 671 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC005046.1-201ENST00000608515 625 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 FTX_3.1-201ENST00000610451 147 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 AC107871.2-201ENST00000612894 502 ntBASIC2.89□□□□□ -1.95
ZNF560Q96MR9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF560Q96MR9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RNY4P24-201ENST00000362735 96 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 Y_RNA.302-201ENST00000364997 102 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RNU6-1200P-201ENST00000384162 107 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RNU6-140P-201ENST00000384566 108 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RNA5SP354-201ENST00000391247 136 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RPL17P12-201ENST00000413391 526 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 HMGB1P11-201ENST00000413899 637 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RPL7P36-201ENST00000444633 681 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 DDX3P2-201ENST00000446138 111 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC020550.1-201ENST00000447385 163 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC010631.1-201ENST00000474150 156 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RN7SL432P-201ENST00000484057 298 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AL160314.1-201ENST00000490836 438 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC009901.1-201ENST00000506703 541 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC096725.1-201ENST00000514266 313 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 RNU6-927P-201ENST00000516199 100 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC090888.1-201ENST00000561335 1141 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC009097.3-201ENST00000563557 1018 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC068790.3-201ENST00000602988 553 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AC006378.2-201ENST00000623178 2476 ntBASIC2.88□□□□□ -1.95
ZNF560Q96MR9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF560Q96MR9 PABPC1P9-201ENST00000426076 1612 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 Y_RNA.18-201ENST00000362461 102 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MIR34A-201ENST00000385130 110 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 RNU2-52P-201ENST00000410680 190 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.87□□□□□ -1.95
ZNF560Q96MR9 MTND1P20-201ENST00000430341 950 ntBASIC2.87□□□□□ -1.95
ZNF560Q96MR9 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms