Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AL021407.1-201ENST00000404531 386 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC245054.2-201ENST00000415639 319 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 ELOCP23-201ENST00000452014 332 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 RN7SL863P-201ENST00000462370 296 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC026427.2-201ENST00000506228 536 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC023050.2-201ENST00000544968 387 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC090888.2-201ENST00000559765 1144 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AL355598.1-201ENST00000604169 202 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AL591516.1-201ENST00000611326 274 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC138932.5-201ENST00000617759 563 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC007998.5-201ENST00000622938 237 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 FO624990.1-201ENST00000636373 85 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
VMP1Q96GC9 AC004520.1-201ENST00000608362 1413 ntBASIC2.99□□□□□ -1.93
VMP1Q96GC9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
VMP1Q96GC9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VMP1Q96GC9 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VMP1Q96GC9 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
VMP1Q96GC9 U3.26-201ENST00000391236 204 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 NDUFS5P1-201ENST00000405668 289 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC078974.1-201ENST00000411597 223 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 ZNF90P2-204ENST00000419323 1075 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AL512649.1-201ENST00000428997 581 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 RPL36AP53-201ENST00000432891 316 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AL831737.1-201ENST00000441288 271 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 FABP5P15-201ENST00000453566 214 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC128713.1-201ENST00000471495 306 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 RN7SL504P-201ENST00000494496 287 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 HSPE1P23-201ENST00000509838 286 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 SNORA31.3-201ENST00000516029 96 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 RN7SKP43-201ENST00000516173 320 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 RN7SKP57-201ENST00000517248 293 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 H3F3AP1-201ENST00000559984 334 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 MIR2682-201ENST00000580305 110 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 MIR4307-201ENST00000582802 84 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 MIR4999-201ENST00000585029 91 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC012493.2-201ENST00000595083 291 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 KC877982.1-201ENST00000602313 470 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AL356280.1-201ENST00000603614 379 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC021755.4-201ENST00000616620 456 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 AL137003.2-201ENST00000606924 2538 ntBASIC2.98□□□□□ -1.93
VMP1Q96GC9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
VMP1Q96GC9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 OR1S2-201ENST00000302592 978 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 RNU6-1200P-201ENST00000384162 107 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 SNORA9-201ENST00000384215 133 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 ISCA1P1-201ENST00000426679 387 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 TIMM9P1-201ENST00000436122 256 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC109329.2-201ENST00000519658 482 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VMP1Q96GC9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
VMP1Q96GC9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 AL354943.1-201ENST00000572103 781 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC012119.1-201ENST00000603184 222 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC011458.1-201ENST00000604034 617 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC008277.2-201ENST00000605196 797 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 TUSC7.1-201ENST00000610969 165 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC025594.3-201ENST00000613068 790 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 uc_338.25-201ENST00000613756 156 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 MIR8057-201ENST00000620957 69 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms