Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MIR4300-201ENST00000581016 96 ntBASIC5.16□□□□□ -1.58
TRIM11Q96F44 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 AC006116.3-201ENST00000592968 361 ntBASIC5.16□□□□□ -1.58
TRIM11Q96F44 AL160281.1-201ENST00000605307 311 ntBASIC5.16□□□□□ -1.58
TRIM11Q96F44 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 CR381572.2-201ENST00000624852 397 ntBASIC5.16□□□□□ -1.58
TRIM11Q96F44 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 MAPK10-286ENST00000641208 8747 ntBASIC5.16□□□□□ -1.58
TRIM11Q96F44 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM11Q96F44 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM11Q96F44 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM11Q96F44 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
TRIM11Q96F44 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.15□□□□□ -1.58
TRIM11Q96F44 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM11Q96F44 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.15□□□□□ -1.58
TRIM11Q96F44 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM11Q96F44 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM11Q96F44 RPL23P2-201ENST00000320371 421 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 RNU6-708P-201ENST00000384217 107 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 AL030996.1-201ENST00000411430 235 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM11Q96F44 AC234779.1-201ENST00000425910 285 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 COX6CP14-201ENST00000469580 174 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 AC087190.1-201ENST00000484462 480 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 AC107032.1-201ENST00000485945 480 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 RN7SL558P-201ENST00000497468 299 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM11Q96F44 SCARNA24.2-201ENST00000516968 130 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.15□□□□□ -1.59
TRIM11Q96F44 MIR3144-201ENST00000579460 79 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM11Q96F44 AC008962.1-201ENST00000605729 304 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 AL161637.1-201ENST00000622380 412 ntBASIC5.15□□□□□ -1.59
TRIM11Q96F44 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM11Q96F44 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM11Q96F44 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM11Q96F44 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC139713.2-215ENST00000641428 5037 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 Y_RNA.27-201ENST00000362540 103 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 SNORA70-201ENST00000384436 135 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 Y_RNA.626-201ENST00000411288 95 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC005798.1-201ENST00000513715 387 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC090151.1-201ENST00000520784 730 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 MIR4716-201ENST00000579628 84 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 MIR1269B-201ENST00000580405 75 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC012119.1-201ENST00000603184 222 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 SNHG22-203ENST00000617833 660 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 U6.106-201ENST00000636360 105 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 AC018529.3-201ENST00000624212 2254 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 LINC02555-201ENST00000563933 1951 ntBASIC5.14□□□□□ -1.59
TRIM11Q96F44 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM11Q96F44 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
TRIM11Q96F44 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM11Q96F44 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM11Q96F44 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 Y_RNA.76-201ENST00000362931 109 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 Y_RNA.439-201ENST00000384119 94 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 RNU6-804P-201ENST00000384286 107 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 RNU6-171P-201ENST00000384354 107 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 RNU6-45P-201ENST00000384471 107 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 Y_RNA.541-201ENST00000384640 113 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 RNU6-959P-201ENST00000384671 107 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 RNU6-417P-201ENST00000384712 107 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 SNORA11.3-201ENST00000408471 128 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 AC069213.2-201ENST00000420238 366 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 AL355433.1-201ENST00000422804 300 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 RPS6P12-201ENST00000432491 726 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 AC004938.1-201ENST00000438468 308 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 AC004453.1-201ENST00000487895 408 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 AC140172.1-201ENST00000502928 141 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM11Q96F44 RN7SKP66-201ENST00000516681 231 ntBASIC5.13□□□□□ -1.59
TRIM11Q96F44 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms